Gene Rpic12D_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3478 
Symbol 
ID8021164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp21713 
End bp22684 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content63% 
IMG OID644832271 
ProductMg2 transporter protein CorA family protein 
Protein accessionYP_002983413 
Protein GI241665054 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.119189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGG TGATCAACAG CGCGCTGTAC CGCAGCGGCA AGCGCGAGCG TGACCTGTCC 
GTCGATGCCA TCAGCGATGT GCTGCATTCG CCGGGCTCGT TTGTCTGGCT GGGCCTGCAC
GAGCCAGACA ACGCGATGCT TGCGCGGGTA CAGGAAGAAT TCGGCCTGCA CGACCTCGCG
ATTGAAGACG CACGCAACGC CCATCAGCGA CCCAAGCTGG AGGTCTACGG CGATTCGCTC
TTCATCGTGC TGAACACCGC GCAACTCGAG CGCGGCAACG TGATCTTCGG CGAGACCCAC
CTGTTCGTCG GCAAGGATTT CCTTGTCTCG GTGCGACATG GACCGTCGGC CTCGTACGCA
CCCGTGCGCG AGCGTTGCGA ACGGACGCCG CAACTGCTGG CCAAGGGTGC GCCCTTCGCG
CTGTATGCAG TCCTGGATTT CGTGGTCGAC AACTACCAGC CCGTGCTGGA AAGCCTGCAG
GAAGAATTCG AGGCGATCGA GAGCCGGATC TTTGGCGACT CGTTTGACCG CGCGTCGATC
GAGCGGCTCT ACACGCTCAA GCGCCAACTG CTGCGCCTGC GTAATGCCGC ATTGCCCGTG
GAGGATATCG CCGGGCAGCT CGTGCGCCTG CACGAAGACT TCGTACCGAA GGAGTTGCGT
GCGTATTTCC GCGACATTGC GGACCACGCG CACCGCGTGG TGGGTGCGCT CGACGTGATT
CGCGAGATGC TGACCACGGC CATCTCCGTG AATGTGGCGT TGGTGTCCGT CACGCAGAAC
GATATCGTCA AGCGACTGGC GGGCTGGGGC GCCATCCTGG CCATCCCGAC CGTGGTCTTC
AGCAACTACG GCATGAACTT CAAGGACATG CCGGAGCTGG AGCATCCGGC GGGCTATCCG
ATCGTGCTGA CGTGCACCGT GCTGGCCTGC GTAGCGCTGT ACCGCAAGCT GCGCAAGTCG
GGGTGGATCT AG
 
Protein sequence
MPMVINSALY RSGKRERDLS VDAISDVLHS PGSFVWLGLH EPDNAMLARV QEEFGLHDLA 
IEDARNAHQR PKLEVYGDSL FIVLNTAQLE RGNVIFGETH LFVGKDFLVS VRHGPSASYA
PVRERCERTP QLLAKGAPFA LYAVLDFVVD NYQPVLESLQ EEFEAIESRI FGDSFDRASI
ERLYTLKRQL LRLRNAALPV EDIAGQLVRL HEDFVPKELR AYFRDIADHA HRVVGALDVI
REMLTTAISV NVALVSVTQN DIVKRLAGWG AILAIPTVVF SNYGMNFKDM PELEHPAGYP
IVLTCTVLAC VALYRKLRKS GWI