Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3466 |
Symbol | |
ID | 8021152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 5109 |
End bp | 6842 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832259 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002983401 |
Protein GI | 241665042 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.222584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCACC ATGCCGAGGT GCCAGGCGGT GGCCAACGGC TGCCGCATGT TCCGCGTTGG AGGGATCTGC TGGCCATGCT GCTTGTCCTG GGCATGGTGC TGCTGCTCGG CAGTGGTGCT CGGCAGATGG TGGGGCCGCT GGTGGCAGCC AGTCAGCCGG AAATCTCCCT CTCGCCGCTT GCGCTGCCCG CATATGTGCT GCGCACGGTA ACGCGCATGT TCGCGGCCCT GGCCTTGTCC CTGCTGTTTA CGTTCACCTA CGCAACGCTG GCCGCCAAGA GCCGGCGCGC CGAGATGGTG CTGATTCCGC TGCTGGATGT CCTGCAGTCG GTGCCGATCC TGGGCTACCT GTCGTTCACC GTGGTGTTTT TCATGGCGCT GTTCCCGGGC AATGTGCTGG GGGCGGAGCT GGCGGCCGTC TTCGCCATCT TCACCAGTCA GGCGTGGAAC ATGGCGTTCA GCTTTTACCA GGCCCTGCGT ACCATCCCCG CCGACCTGGA CGAGGCCAGC CGGGGCTTTC GCGCCTCGTC CTGGCAGCGC TTCTGGCGGC TTGAGGTGCC ATTCGCCATG CCGGGCCTGG TATGGAACAT GATGATGTCC ATGTCCGGCG GATGGTTCTT CGTGGTCGCA TCGGAGGCGA TCTCGGTGGG CGATGTGCGG GTCGCGCTAC CGGGTGTCGG CGCCTACGTT GCCCGTGCGA TCGCGCAGCG TGATCTGGGC GCGGTGGGTT GGGCGATCCT TGCAATGGCC GTGGCAATCG TGCTGTATGA CCAGTTGCTC TTCCGGCCCA TGGTGGCGTG GGCCGACAAG TTCCGCTTCG AGCAGACGGC GAGCCAGATG CCCCCGAGGA GCTGGCTGCT CGATCTGTTT CACCGTTCCG CGTGGGTGCA ACGGATGATG GCGCCGGTTG GTATCGCGCT GCATCAGGCT GCACGGGCCC AGCTGCGTTG GCCCCTGCCC GCGATGCGAT GGAAAGGCGC CATGCCGCGG CGACTGGGTG ATGCGCTCTG GCTCGGTCTT TGCGCCGCCG GCGCGGCGTA CGCGATGCTG GCCCTCTACC GCCTTGCCGG ACGAACATTG GCGTGGACAG ACGTGGCGAC CGTGGCGCGC AGCGGCGCGT TCACGCTGCT GCGTGTGATG GTGCTGATCG CGTTGGCGTC GATCGTCTGG GTACCCGTCG GCGTGGCAGT CGGATTGAGC CCGCGCTGGA CGGCGCGAGT GCAGCCGCTG GCGCAGTTCC TGGCGGCGTT TCCCGCCAAT CTGCTGTTTC CCGTGGTGGT GTTCCTGATC GTGCGTTTCC ACGGTTCAGT CGATGTCTGG CTCAGCCTGC TCATGATCCT GGGGACCCAG TGGTACATCC TGTTCAACGT GATCGCAGGG GCGGCGGCGT TCCCGAGCGA CCTGCGCGAG ACTGCGACCA GCTTCCGCAT CCGCGCCCCG AACTGGTGGC GCAAGGTGAT GCTGCCGGGC ATCCTGCCCT ACTACGTGAC AGGGGTCATC ACGGCCTCCG GTGGTGCCTG GAACGCCAGC ATCGTCGCCG AAGCCGTCAG CTGGGGTGCC GTGCATCTGC AGGCGCAAGG ATTGGGTGCG TACGTCGCCC AGCAGACTGC TGCCGGCGAT TACCCCCGCA TCGCGTTGGG CATCGCGGCC ATGTCGTTGA TGGTGATTGC CACCAACCGC CTGCTGTGGC GGCCACTGTA TGCATATGCG GAACGTCGCA TGCGCCTGGA CTGA
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Protein sequence | MEHHAEVPGG GQRLPHVPRW RDLLAMLLVL GMVLLLGSGA RQMVGPLVAA SQPEISLSPL ALPAYVLRTV TRMFAALALS LLFTFTYATL AAKSRRAEMV LIPLLDVLQS VPILGYLSFT VVFFMALFPG NVLGAELAAV FAIFTSQAWN MAFSFYQALR TIPADLDEAS RGFRASSWQR FWRLEVPFAM PGLVWNMMMS MSGGWFFVVA SEAISVGDVR VALPGVGAYV ARAIAQRDLG AVGWAILAMA VAIVLYDQLL FRPMVAWADK FRFEQTASQM PPRSWLLDLF HRSAWVQRMM APVGIALHQA ARAQLRWPLP AMRWKGAMPR RLGDALWLGL CAAGAAYAML ALYRLAGRTL AWTDVATVAR SGAFTLLRVM VLIALASIVW VPVGVAVGLS PRWTARVQPL AQFLAAFPAN LLFPVVVFLI VRFHGSVDVW LSLLMILGTQ WYILFNVIAG AAAFPSDLRE TATSFRIRAP NWWRKVMLPG ILPYYVTGVI TASGGAWNAS IVAEAVSWGA VHLQAQGLGA YVAQQTAAGD YPRIALGIAA MSLMVIATNR LLWRPLYAYA ERRMRLD
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