Gene Rpic12D_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3320 
Symbol 
ID8021004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3500870 
End bp3501085 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content67% 
IMG OID644832113 
Productsulfur carrier protein ThiS 
Protein accessionYP_002983256 
Protein GI241664896 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGA ACGTCACCCT CAACGACCTG TCGCTGGCCC TGCCTTTGGG CAGCACGCTG 
GCCGACGCCA TTGGTGCGGC CACGCCGCAA CTGCAGATCG CGCCGCCGTT TGCCGCATCC
GTGAATGGCG ATTTCGTGCC CAAGGCGCGC CATGCGCAGC ACGCGCTCAA GACAGGCGAC
CGCATTGCAC TCGTGCAGCC CGTCGTGGGC GGCTAG
 
Protein sequence
MTLNVTLNDL SLALPLGSTL ADAIGAATPQ LQIAPPFAAS VNGDFVPKAR HAQHALKTGD 
RIALVQPVVG G