Gene Rpic12D_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3278 
Symbol 
ID8020962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3461735 
End bp3462169 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID644832073 
Productthioesterase superfamily protein 
Protein accessionYP_002983216 
Protein GI241664856 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCGT CCCAAATGAC CGGCCTGCAA CTGCTGCAGG CCATGTCGCA CGGTGATCTC 
CCGCGCGCGT CCATCAGCGA AACCATCCCG ATGACGATGG ATGTCATCGA AGCAGGCACC
GTGCACTTCG GTGCCCAGGC CGACAAGCGC CACCTCAATC CGCTGGGCGG TGTGCACGGT
GGCTTTGCGG CGACGGTGCT CGACTCCGTG ACCGGCTGCG CCGTGCATTC GATGCTCGAA
GCCGGCGTCG GCTACGGCAC GGTTGACCTG AACGTGAAGA TGGTGAAGGC TGTGCCGGTC
GATACGCCGC TGGTGGCCGT TGGGCGCGTG CTGCATGTCT CGCGCACGAT CGGCGTGTCG
GAGGGCACGC TCAAGACCCA GGACGGCACG TTGCTGGCGC ATGCCACGGC AACGTGTGTC
ATCCGCCGTC CGTAA
 
Protein sequence
MHPSQMTGLQ LLQAMSHGDL PRASISETIP MTMDVIEAGT VHFGAQADKR HLNPLGGVHG 
GFAATVLDSV TGCAVHSMLE AGVGYGTVDL NVKMVKAVPV DTPLVAVGRV LHVSRTIGVS
EGTLKTQDGT LLAHATATCV IRRP