Gene Rpic12D_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3212 
Symbol 
ID8020896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3394286 
End bp3395026 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID644832008 
ProductABC transporter related 
Protein accessionYP_002983151 
Protein GI241664791 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CCGCGCTCCA GATCAAGGAC CTGCACGCCT GGTACGGCGA ATCGCACATC 
CTGCATGGTG TCGACCTGAC CGTGAACCGC GGCGAGGTGG TCACGCTGCT CGGCCGCAAC
GGCGCGGGCC GCACCACCAC GCTGCGCGCC ATCATGGGCC TGGTGGGCAC GCGCAAGGGC
TCCATCGTCG TGCATGACGC AAGCGGCCAG GGCGTGGAAA CGATCGACCT GCCCACGCAC
AAGATCGCCC ACTGCGGCAT CGGGTACTGC CCCGAAGAGC GCGGCATCTT CTCGAGCCTG
TCGTGCGAAG AGAACCTGAT GCTGCCGCCG GTGCTGAAGG GCCAGGTGGC CAAGACCGGC
AATGCCGGTA TGAGCATCGA CGAGATCTAC GAGATGTTCC CCAACCTGGC CGAGCGCCGC
CAAAGCCAGG GCACGCGCCT GTCGGGCGGC GAGCAGCAGA TGCTGGCGGT CGGGCGCATC
CTGCGCACCG GCGCGAACTT GTTGCTGCTC GACGAGATTT CCGAAGGATT GGCGCCGGTG
ATCGTGCAGG CGCTGGCCCG CATGATCCTG ATGCTCAAGA AGCGCGGCTA CACGGTGGTG
ATGGTGGAGC AGAACTTCCG CTTTGCCGCG CCGCTGGCAG ACCGGTTTTA TGTGATGGAA
CACGGCCGTA TCGTCGAGCG TTTCGAGGCG GCGCAGTTGC AGGACAAGAT GCCGGTGCTG
CACGAGCTGC TCGGCGTTTA A
 
Protein sequence
MSTPALQIKD LHAWYGESHI LHGVDLTVNR GEVVTLLGRN GAGRTTTLRA IMGLVGTRKG 
SIVVHDASGQ GVETIDLPTH KIAHCGIGYC PEERGIFSSL SCEENLMLPP VLKGQVAKTG
NAGMSIDEIY EMFPNLAERR QSQGTRLSGG EQQMLAVGRI LRTGANLLLL DEISEGLAPV
IVQALARMIL MLKKRGYTVV MVEQNFRFAA PLADRFYVME HGRIVERFEA AQLQDKMPVL
HELLGV