Gene Rpic12D_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3129 
Symbol 
ID8020813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3299201 
End bp3299671 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID644831925 
Producthypothetical protein 
Protein accessionYP_002983068 
Protein GI241664708 
COG category[S] Function unknown 
COG ID[COG5501] Predicted secreted protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CAATCAATCT GGGCCGCCGT GACGTGCTGC GTGCCGGCGC CATGATGGCG 
CTGCTGGTGT CTGCCGGCAT TGCCACGCCC GCCCAGGCGG CCGAGTGGAA CAAGGCCGCC
TTTGCCGTGA AGGGCGTGAA CGACGTGCTC AAGCAACTGG GCGGTGGCGC GGTGGAGAAG
GGCGGCGCCG GCATACAGCT CACCGCACCG GACATTGCTG AGAACGGCGC CGTGGTGCCG
CTGGTCGTGA CGAGCACGCT GCCGGGCACC GACCTCATCG CCATCCTGGT CGAAAAGAAC
CCGAACACGC TGGCTGCCAC GTTCGCCATT CCGGCCGGCA CCGACCCGTT TGTGAGCACG
CGCGTGAAGA TGGGCGAGAC GTCAACGGTC TACGCCGCCG TGCGCGCCAA CGGCAAATGG
GTGCTGGCGA GCAAGGAAGT GAAGGTCACC CTGGGTGGCT GCGGCGGTTA A
 
Protein sequence
MNDAINLGRR DVLRAGAMMA LLVSAGIATP AQAAEWNKAA FAVKGVNDVL KQLGGGAVEK 
GGAGIQLTAP DIAENGAVVP LVVTSTLPGT DLIAILVEKN PNTLAATFAI PAGTDPFVST
RVKMGETSTV YAAVRANGKW VLASKEVKVT LGGCGG