| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3025 |
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| Symbol | |
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| ID | 8020708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3194177 |
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| End bp | 3195307 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644831822 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002982966 |
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| Protein GI | 241664606 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT CTGCCATTCT GGTTGCAGTT GGCGCCCTGT TCGCAGGTTC TGCCTACGCC
CAATCGAGCG TGACGCTGTA CGGTATTGTC GATACCAGCA TTCACTACAT CAACAACGCC
AACCAAGCTG GCAACAGCGT GACCCAGATG GAAAGCGGCG CTGTGTCGAA CAGCCGCTGG
GGCCTGAAGG GCTCGGAAGA CCTGGGCGGC GGCACCAAGG CTCTGTTCGT GCTGGAAAGC
GGCTTCAACT CGGCCACCGG CAAGATGAGC AGCGCTGGTA CGTTGTTCAA CCGTCAGTCG
TTCGTGGGTC TGTCGAACAA GGACCTGGGC ACCATCACCC TGGGCCGTCA ATACAACTTC
GGCTTCACGA CGGGCGGCAA CTTCGACCCG CTGGGCGTGG GTAACTACGA CGGCAACTCG
TGGATGTACT ACGGCCTGAC CGGTCTGCGT GAATCGAACA TGCTGAAGTA CGAAGGCAAG
TGGAACGGCC TGTCGGTCGG CCTGGCCTAC GGCTTTGGCG AAGTTCCGGG TGCAGCAAGC
CAGAACTCGT ACGTTGGCGG CACGGTGGCC TATGAATTTG GCCCGGCCTA CATCGGCGCA
TTCGCACAGC AGCACAAGGA TATTGCTGGC AACAAGCAAA CCGTTTGGGG TATCGGTGGT
AACTACACCA TCGCTGCGGC CAAGCTGTTC GCAGGCTACA TCGACAGCAG CGACGCCACG
GGTTGCGTGA ACAGCTCGGC AAACTGCGTC GGCGGCAGCG CCTTTGGCCT GAACATTTAC
GGCAACGCCA CCTCGGGCGC TGGCCTGACC CCGGGCGCCA CGAAGCGTCG TGACCACGTC
GGCATCCTGG GCGTGACGTA CAACATCACC CCGGCCCTGG CTCTGACGGG CGCGTTCTAC
TACGACAGCA TTAACAACGC TGCTCTGACC GCCGGCAACG ACGGCAAGCG CTACACCGGT
GTTCTGCTGG CCGAGTACGC CCTGTCCAAG CGCACGCAAG TGTATGGCAC GGTCGACTAC
AACAAGGTCA AGGACGCAGC TCTGCCGGAA CTGTCGGGTG GCGGCAACGC AACCGGCGTT
GGCAAGTCGA ACCAGACGAG CGTTGGCGTG GGTATCCGCC ACATCTTCTA A
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| Protein sequence | MKKSAILVAV GALFAGSAYA QSSVTLYGIV DTSIHYINNA NQAGNSVTQM ESGAVSNSRW
GLKGSEDLGG GTKALFVLES GFNSATGKMS SAGTLFNRQS FVGLSNKDLG TITLGRQYNF
GFTTGGNFDP LGVGNYDGNS WMYYGLTGLR ESNMLKYEGK WNGLSVGLAY GFGEVPGAAS
QNSYVGGTVA YEFGPAYIGA FAQQHKDIAG NKQTVWGIGG NYTIAAAKLF AGYIDSSDAT
GCVNSSANCV GGSAFGLNIY GNATSGAGLT PGATKRRDHV GILGVTYNIT PALALTGAFY
YDSINNAALT AGNDGKRYTG VLLAEYALSK RTQVYGTVDY NKVKDAALPE LSGGGNATGV
GKSNQTSVGV GIRHIF
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