Gene Rpic12D_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2997 
Symbol 
ID8020679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3162179 
End bp3163135 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content68% 
IMG OID644831793 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002982938 
Protein GI241664578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCCG CCAAGCCTGC CTCCTCATCC CAGACTTCGT CCGCCACCGA CGACACCCTC 
ATGCTTGACG CCGCCGCCGA TGCCGCCCCA GAGGCAAATG AGCCGCCCGA AGCTGCGCTG
TCGCGTTTCC CGCAGTTGCT ACGTTTCTGG CGGACGCGGC GTGGGTACAG CCAGCTGGCG
CTGGCCCTGG CGGCGGGTGT GTCGCAACGG CATGTGAGCT TTCTGGAATC GGCCCGCGCG
GCGCCCAGCC GCAACATGAT CCTGCAACTG GCCGAGGAGC TGAACGTGCC GCTGCGCCAT
CGCAACCAGA TGCTGCTGGC GGCCGGTTTC GCGCCCGCCT ATTCCGAGCA GGGCCTCGCC
ACGCCGCCCG ATGAAACCTC GCCGATGATG CAGGCGGTGC GGCATGCGGT GAAGCTGATT
CTTGATAAGC AGGCGCCGTA TCCCGCCATC GTGCTCGACC GCTTCTGGCA TGTGCTCGAT
GCGAATGCCG CGCATCGCCG CCTGATGCGC TGGGCCATCG GCGACGACCG GTCCGAAGGC
GCGCCGGGTG CCGTCAACAT GATGAAGCTG GTATTCGACC CGACCGCGCT GTGGCCGGCC
ATCGCCAACC GCGATGCCGT CGGCCGCTAC CTGGCCCGGC GCGTGCGGCA GGAACTGGCC
CTGCAAGCTA TTGACCCGGC CACGCAACGG CTGCTGCGCG ACATCCGCGC GATGCAACCG
GCGCTGTTCG ATGCGGCGGA TGCGCCGGCC TCCCCCGCCG CGCTCCCGCA CGATGCCGGC
GATCCGCCGC CGTTCCTTCC CATTTCGCTG CAGCGCGACG GCGTGACGAT CTCGCTGTTC
TCCACGCTCA CCACGCTGGG CACACCGCGC GATGCGGGGC TGCAGGAGAT GCGCATCGAG
TGTTTCTATC CGGCGGACGA GGCGTCCCGG CGGGCCTTGG AGCGTATTAC GCTGTAA
 
Protein sequence
MTPAKPASSS QTSSATDDTL MLDAAADAAP EANEPPEAAL SRFPQLLRFW RTRRGYSQLA 
LALAAGVSQR HVSFLESARA APSRNMILQL AEELNVPLRH RNQMLLAAGF APAYSEQGLA
TPPDETSPMM QAVRHAVKLI LDKQAPYPAI VLDRFWHVLD ANAAHRRLMR WAIGDDRSEG
APGAVNMMKL VFDPTALWPA IANRDAVGRY LARRVRQELA LQAIDPATQR LLRDIRAMQP
ALFDAADAPA SPAALPHDAG DPPPFLPISL QRDGVTISLF STLTTLGTPR DAGLQEMRIE
CFYPADEASR RALERITL