Gene Rpic12D_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2645 
Symbol 
ID8020309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2789260 
End bp2790168 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID644831425 
Productcytochrome c assembly protein 
Protein accessionYP_002982588 
Protein GI241664228 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTG TACTGTATGC GCTGACGGCG CTTCTCTACG GCATCCTCGC TTCGGTAGCG 
TGGGCGCGAC GCGGTGGACT GGGTGCCCGG GCGCCGGCGG GAGCCATGGC GGCAGGCGGT
CAGTCGCCGG GTGCCACGGT GCTCGTTCCG CCGCCTCCGG GGGCTGCCGA CACTGTTCCG
GGCTGGTGGC GCTGGGGTCT GCTGGCCGCC TTGATCGCGC ACGGGTTCCT GCTGCACGAG
ACGATCTTCC CGGCCAGCGC CATGGTATTT GGCTTTGCCT ATGCGTTGTC GGCCATGCTG
TGGCTGGGCG TGGGCATTTT CTGGATCGAA AGCCTCTTCT TTTCGCTGGC CGGCCTCGGC
CTGCTCGTGA TGCCGGTGGC GCTGGTCGGA AGCCTGCTGC CGTTGGCCTT TCCGGGTACG
CAAATTCTCG GCTATGCGGC CAGCCCCCTG TTCAAGCTGC ACTTCGCTAT TGCCAACGTC
GCCTACGGGC TGTTCACGCT AGCGGCATTC CACGCGATCC TCATGCTGGC TGCAGAGCGT
CGCCTGCACA CCATCAACCG CCCGGAGGCA AGCGGGTTCG GCCGTTGGCT GGATCTGCTC
CCGCCGCTGC TCACGCTCGA AAAACTGCTG TTCCGGCTGA TCGGGGCGGG CTTCGTTCTG
CTGACGCTGA CGATCGCCTC GGGCGTGCTG TTCTCCGAGC AGCTGTTTCA CAGCGCCTTC
CATTTCGATC ACAAGAATAT CTTTGCCGTG CTGTCGTGGG TGATGTTCGG CGGCATTCTG
ATCGGTCGGC GTTTTCGCGG CTGGCGCGGA CGCGTGGCGC TGCGCTGGGT GATGGCGGCC
TTCGCGATCC TGATGCTGGC GTATGTGGGC AGCCGCTTCG TGCTCGAAGT CATCCTGCAT
CGCGCCTAG
 
Protein sequence
MAIVLYALTA LLYGILASVA WARRGGLGAR APAGAMAAGG QSPGATVLVP PPPGAADTVP 
GWWRWGLLAA LIAHGFLLHE TIFPASAMVF GFAYALSAML WLGVGIFWIE SLFFSLAGLG
LLVMPVALVG SLLPLAFPGT QILGYAASPL FKLHFAIANV AYGLFTLAAF HAILMLAAER
RLHTINRPEA SGFGRWLDLL PPLLTLEKLL FRLIGAGFVL LTLTIASGVL FSEQLFHSAF
HFDHKNIFAV LSWVMFGGIL IGRRFRGWRG RVALRWVMAA FAILMLAYVG SRFVLEVILH
RA