| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2640 |
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| Symbol | |
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| ID | 8020304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2782423 |
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| End bp | 2784582 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831420 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_002982583 |
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| Protein GI | 241664223 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.356378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCG ACACGAACCA CGCCAACAAC GGCAGCCGCC GCAACTTCCT CAAGATGGCC
AGCACGGGCG CGATTTCCGC TGCTGCGCTC GCCGCGTTCC CGCCATCGAT CCGCCGTGCG
CTGGCGATTC CCGCCAACAA CGCCACCGGC ACGATGCGCG ACGTTGAACA CGTGGTGATC
CTGATGCAGG AGAACCGCTC GTTCGACAAC TACTTCGGCA CGCTGCAAGG TGTGCGCGGC
TTCGGCGACC GCTTCCCCAT TCCGCTGGCC GGTGGCCTGA ACGTCTGGCA GCAGACCTAC
GTGCCAAGCA GCGGGCCGAG CCGCACGGTG CTGCCGTATT ACCTCGACAG CAGCGCCGGC
AACGCGCAGC GCGTGTCTGG CACGCCGCAC AGCTACCCCG ATGCGCAGAA CGCGTGGGAC
CTGGGCCGCA TGAGCAAGTG GCCGACCTAC AAGCAGACGC AGTCGATGGG CTATTACAAG
CAGGCCGAGC TGGACTTCCA GTTCGCGCTA GCCAACGCCT TCACGCTGTG CGATGCGTAC
CACTGCTCGT TCCACGGCGG CACCAACACC AACCGCCTGT TCCACTGGAC GGGCACGAAC
GACCCGACGG GCGCCGCAGG CGGCCCGGTC ATCGACAACA GCGGCGACCA TCTCGACGCC
GGCGTCACGT ACAACTGGAA GACCTATCCC GAGCGCCTGC AGGCCGCCGG TGTGTCGTGG
AAGGTCTACC AGAACATGCC GGACAACTTC ACCGACAACC CGCTCGCCGG GTTCAAGGCC
TACCGCGATG CCAACGCCGC GCGCGGCAAC CTGGCCGACG GCAGCCCGTT CCCGCCGTAC
ACGCCGGCCG ACGAAACCGT CAGCCCGCTC ATCAAGGGCG TCGGCAACAC CATGCCCGAC
GGCGGCTTCC TGCAGGCGTT GAAAGACGAC ATCGCCGCCG GCCAGCTGCC GCAGGTCTCG
TGGATCGTCG CACCGGCCAC GTATTCCGAG CACCCTGGCC CGTCGAGCCC CGTGCAGGGC
GCGTGGTACA CGCAGGAAGT GCTCAACGCG CTCACCGCCA ACCCTGCCGT GTGGAGCAAG
ACCGTGCTGT TCATCAACTT CGATGAAAAC GACGGATTCT TCGATCACGT ACCGCCGCCC
GCGGCGCCTG CCTATGACAA CGGCGTGCTG GCCGGCAAAT CGACCATCAG CACGGCCGGC
GAGTATCACA GCGACAAGAA TCCGTACGGA CCCGGACCGC GCGTGCCGAT GTACGTCGTC
TCGCCGTGGA GCCGGGGTGG CTGGGTCAAC TCGCAAGCGT TCGATCACAC CTCGGTGCTG
CGCTTCCTGG AGCTGCGCTT CAACGTCAAG GAGGCGAACA TCAGCGCGTA TCGCCGCGCG
GTGCTGGGCG ACCTGACCAG CGCCTTCAAC TTCGTCAACC CGAACACCGA AACGCTGCCC
ACGCTGCCCA GCCGCGACAA GGCAACGGCC GACTCGATCC GCACGGCGCA AGGCTTGAAG
CCGCAGGTGC CGCTGCCCGC CGTCTCGGCG CAGCAGATGC CGAAACAAGC CACCGGCACC
CGCCCTTCGC GCGCCCTGCC GTACGAACTG CACGTCAGCG CGCGCGAAGA CGCCACCAAC
CGCGCGCTGC GCCTGATCTT CAGCAACACC GGCACGGCGG CCGCTGTCTT CCACGTGTAC
GACCGCCTGC ATCTGGACCG CGTGCCGCGC CGCTATGCGG TCGAGCCCGG CAAGATGCTC
GACGACACCT GGGACGTGTT CACCGCCGAC AAGGGTAAAT ACGACCTGTG GGTGCTCGGG
CCCAACGGCT TTCACCGCGC CTTCTCGGGC GACGTGAGCG CCGTGTCGGC AGCGGGTTCG
AGCGCGCCGG AAATTCGCGT GTGCTACGAC GTAACCAGCG CCGAGGTCTA CGTGACGATG
ATGAACACCG GCACCGCCGG CTGCACGTTC ACCGTCAAGC CGAACGCCTA CCGCAATGAC
GGCCCGTGGA CGTTCGACAT TCCGGCCGGC AAGCAGCTCG ACCAGCACTG GCCGATCGCG
CGCCAGGGCA ACTGGTACGA CTTCACGGTG ACGGTGCCGC AAGGCGGCTT CACGCGGCGT
TTTGCCGGTC GCATGGAAAC GGGCAAGGAC GGCGTGTCCG ACCCGGCGAT GGGCACGTGA
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| Protein sequence | MTSDTNHANN GSRRNFLKMA STGAISAAAL AAFPPSIRRA LAIPANNATG TMRDVEHVVI
LMQENRSFDN YFGTLQGVRG FGDRFPIPLA GGLNVWQQTY VPSSGPSRTV LPYYLDSSAG
NAQRVSGTPH SYPDAQNAWD LGRMSKWPTY KQTQSMGYYK QAELDFQFAL ANAFTLCDAY
HCSFHGGTNT NRLFHWTGTN DPTGAAGGPV IDNSGDHLDA GVTYNWKTYP ERLQAAGVSW
KVYQNMPDNF TDNPLAGFKA YRDANAARGN LADGSPFPPY TPADETVSPL IKGVGNTMPD
GGFLQALKDD IAAGQLPQVS WIVAPATYSE HPGPSSPVQG AWYTQEVLNA LTANPAVWSK
TVLFINFDEN DGFFDHVPPP AAPAYDNGVL AGKSTISTAG EYHSDKNPYG PGPRVPMYVV
SPWSRGGWVN SQAFDHTSVL RFLELRFNVK EANISAYRRA VLGDLTSAFN FVNPNTETLP
TLPSRDKATA DSIRTAQGLK PQVPLPAVSA QQMPKQATGT RPSRALPYEL HVSAREDATN
RALRLIFSNT GTAAAVFHVY DRLHLDRVPR RYAVEPGKML DDTWDVFTAD KGKYDLWVLG
PNGFHRAFSG DVSAVSAAGS SAPEIRVCYD VTSAEVYVTM MNTGTAGCTF TVKPNAYRND
GPWTFDIPAG KQLDQHWPIA RQGNWYDFTV TVPQGGFTRR FAGRMETGKD GVSDPAMGT
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