| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2612 |
|---|
| Symbol | |
|---|
| ID | 8020276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2750009 |
|---|
| End bp | 2750923 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644831392 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_002982555 |
|---|
| Protein GI | 241664195 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCC TCGCAAACCG TCCGGACTGG TCCGGCAGCA GCACGCTCAC CAAGGCGCTG
GTGGTGTCGC TGGCCGTGCA TGTTGTACTG CTGTTCGTGC GCGTGGTGGC CCCCGAGGCG
TTCGATATCA AGCGCGAAGA TCCGGGCCTC GATGTGGTGC TCGTCAACGC CAAGTCGTCG
ACGGCACCGT CCAAGGCGAC GGCCGTGGCC CAGGTCAACC TGAACGGCGG TGGCGAATAT
GACCAGCAGC GCGCCACCAC GCCGCTGCCC GCCGACACCA ATGAGCAGAC CGGCGACGCC
ATCAAGCTCA CACAGCGCCG CGTTGAATAT CTCGAGCAAG AGCAGCGCCG CCTGCTGACG
CAATCGACCG AGCGCGCGCC GCTGGTCAAC GATCGTCAGG TCAAGCCCGG CGAGCGTCCG
CAGCCGTCGC CCACCAACGG CACCGACGAC CGCACCACGC AAGACGAAAT CGCCCGGCTG
CAGGCCGAGA TCGACCGGAA TCTCGAGAAC TACGCCAAGC GCCCGCGCCG CAATGTGCTG
ACAGCCGCCA GCGCCCGCCA GGTGGATTAC GCCCGCTACT ACGATGCCGT GCGGCGCAAG
ATCGAAGCCC GCGGCACCGC AAACTTTCCC AGCCAGAACG GCCGCCCGCT GTATGGCGAG
CTGATCGTCG TGATCAGCAT CAACCGCGAA GGCCAGCTCG GCTATAACCA GGACGGCTAC
AAGATCGAAG GCATCGAGAT CGCAAAGAGC TCGGGCAACC CCGCGCTGGA TCGCCAGGCC
GTGGCCATCG TGCGTTCGTC TTCACCGTTT GGCGCCTTCC CGGCCGAGAT GCGCAAGCGC
GTCGACATCC AGGATGTGGT CGCCACGTTC AAGTTCACCC GCGCAGGCTT GGAAACCCAC
CTGCAGACCC GTTGA
|
|---|
| Protein sequence | MAALANRPDW SGSSTLTKAL VVSLAVHVVL LFVRVVAPEA FDIKREDPGL DVVLVNAKSS
TAPSKATAVA QVNLNGGGEY DQQRATTPLP ADTNEQTGDA IKLTQRRVEY LEQEQRRLLT
QSTERAPLVN DRQVKPGERP QPSPTNGTDD RTTQDEIARL QAEIDRNLEN YAKRPRRNVL
TAASARQVDY ARYYDAVRRK IEARGTANFP SQNGRPLYGE LIVVISINRE GQLGYNQDGY
KIEGIEIAKS SGNPALDRQA VAIVRSSSPF GAFPAEMRKR VDIQDVVATF KFTRAGLETH
LQTR
|
|---|
| |