| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2531 |
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| Symbol | |
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| ID | 8020195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2660783 |
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| End bp | 2662237 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644831312 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002982475 |
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| Protein GI | 241664115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.396658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGG CATGCCTATT GACCACCGCC TGCGCGGTCG GACCGGATTT CAAAACACCC
GAAGCCCCTA AGGTAAGCGG CTATACGCCG CAGCCACTGC CGCAACAGAC GTCGACCGCC
GCCACGCAGG GTGGAGAGGC GCAGCGCTTC GTGTCGGGGA TGCCGGTGTC CGACCAATGG
TGGAAGACGT TTCAGTCGGA AAAGCTGAAC AAGACAATCG CCAATGCAAT TGCCGCCAGC
CCGACTCTTG CCGCCGCCCA GGCTGCCCTG CGCGTGGCGC AGCAGCAGAC GCGGGCACAA
CAGGGAGCGT TCTTCCCGAT GCTGCAGGGC TCTTATCAGC CCAGCCGCCA ACAGAATGCC
GTGGGCACGA TTTCGCCCAC GCTCACCTCC GGTGCGCCGA TCTACACCCT GCACACCGCG
CAGCTCACGG TGAGCTATGC ACCGGATGTC TTCGGGCTGA ATCGCCGCCA GGTGGAATCG
CTCAAGGCAA CCGAAGATGC GCAGTATTTC CAGATGGAGG CGGCTTATCT CACACTGGCG
TCCAACATCG TGGTGGCTGC CGTGCAGGAA GCCTCGCTGC GCGCACAGAT CGCGGCGCAG
CAACGCATTG TCGATATCAA TACGCAGTTG CTCGACAACC TGCACAAGCA GTTCCAACTT
GGCGCTGTGA CGGGGCTGGA GGTAGCGGCC GCCGAGACGG CGCTGGCGCA AGCGGAGCAG
GCGCTGCCCA ATCTGCAAAA GCAACTGGCG GTGCAGCGCG ATCTGTTGGC CGCTCTGGCC
GGCAAACTAC CCAGCGAAGG CATCCCCGAG ACCTTCACGT TTGCGGACTT CACGCTGCCG
AAGGAGTTGC CGGTGTCGCT GCCGTCGGAT CTCGTGCGAC AACGCCCTGA CGTGCGTGCC
GCCGAAGAAC AACTGCACGC CGCGACTGCA CAGGTAGGTG TGGCCATCGC CAATATGCTG
CCGCAGTTGA CGATTACCGG GACCAAAGGC GGCACCGCCG AAATCTTCAG CCAGATGTTC
CGTGACGGGA ACGTCTTTTG GAGCCTGGTC GGCAACGTGG CACAGACGTT CTTTGACGGC
GGGGCGCTGC TGGCGAAAAA GCGGGCGGCG GTTGCGGGCG TCGATCAAGC GGAGGCGCAG
TACCGTGGCA CCGTGGTCAC CGCTTTCCAG AACGTCGCCG ACACCCTACA CGCGCTGGAT
GCCGACGCCG ACGTGCTGAA AGCCTCGCTC AAATCCGAGC AGGCCGCACG CAAGACGTTG
AACATCACAG ACAAGCAGCG GGCAATCGGC CAAGTCAACC TCCTCGCCGT GCTGAACGCC
GAGCAGGCCT ATCAGACAGC AGCGCAGGCC ACTATCGAGG CGCGCGCAAA CCGACTCTCG
GACACGGCTG CGCTATTTCA AGCGCTAGGG GGCGGGTGGT GGAACCGGGG CGGAGGTGAC
ATCGCACAGC GCTGA
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| Protein sequence | MAAACLLTTA CAVGPDFKTP EAPKVSGYTP QPLPQQTSTA ATQGGEAQRF VSGMPVSDQW
WKTFQSEKLN KTIANAIAAS PTLAAAQAAL RVAQQQTRAQ QGAFFPMLQG SYQPSRQQNA
VGTISPTLTS GAPIYTLHTA QLTVSYAPDV FGLNRRQVES LKATEDAQYF QMEAAYLTLA
SNIVVAAVQE ASLRAQIAAQ QRIVDINTQL LDNLHKQFQL GAVTGLEVAA AETALAQAEQ
ALPNLQKQLA VQRDLLAALA GKLPSEGIPE TFTFADFTLP KELPVSLPSD LVRQRPDVRA
AEEQLHAATA QVGVAIANML PQLTITGTKG GTAEIFSQMF RDGNVFWSLV GNVAQTFFDG
GALLAKKRAA VAGVDQAEAQ YRGTVVTAFQ NVADTLHALD ADADVLKASL KSEQAARKTL
NITDKQRAIG QVNLLAVLNA EQAYQTAAQA TIEARANRLS DTAALFQALG GGWWNRGGGD
IAQR
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