| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2496 |
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| Symbol | |
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| ID | 8020160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2622282 |
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| End bp | 2623781 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831277 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_002982440 |
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| Protein GI | 241664080 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGC CATCGTCGTT GTCCGCCACC GCCCGCGATC TGACCGCCCT GCAGGCCGAG
CTGACCGCCG CGCTGTCCAA CATCGTGTCC GACGACGCGC TGCTCTGGGA GCGCGAGGAC
ACTACTCCGT ATGAATGCGA CGGCCTCGCC GCTTACCGGC AGGTGCCGCT GGCCGTGGTG
CTGCCGGATA CCGAGGCGCA GGTCGTCGAG ATCCTGCGCG TGTGCCACCG CATGGGCGTG
CCCGTTGTGC CGCGCGGCGC AGGAACGAGC CTGTCCGGCG GCGCGATGCC GACGCCGGGC
GGGCTGGTGC TGTCGCTGGC CAAGTTCAAA CGCATCATCA AGGTCGACCC ATACACACGT
ACCGCGGTGG TCCAGCCGGG CGTGCGCAAC CTCGCCATTT CGGAAGCCGC CAACCCGCAT
GGGCTGTACT ACGCGCCCGA TCCGTCGTCG CAAATCGCCT GCACCATCGG TGGCAACGTC
AACGAAAACT CGGGCGGCGT GCACTGCCTG AAATACGGCC TGACCGTACA CAACGTGCTG
CGCGTGCGCG CCGTGATGAT GGACGGCGAG GTGGTCGAAT TCGGCAGCGA GGCGCCCGAC
GCACCGGGCC TGGACCTGCT GGCCACGGTG ATCGGCTCCG AAGGCATGCT GGCGGTGGTG
ACCGAAGTGA CCGTGCGCCT GATCCCGAAG CCGCAACTCG CGCAGGTGAT CATGGCGAGC
TTCGACGATG TGGAATCGGG CGGCAACGCC GTGGCCGATG TGATTGCCGC GGGCATCATC
CCGGCCGGGC TGGAGATGAT GGACAAGCCC GCCACCGCCG CCGTTGAGGA ATTCGTCTGC
GCCGGCTACG ACCTGGACGC GGCCGCCATC CTGCTGTGCG AATCCGACGG CACGCCTGAA
GAGGTGGCCG AAGAGATCGC GCGCATGAGC GAAGTGCTGC GCGCCTCGGG TGCCACCCGC
ATCCAGGTCT CGCAAAGCGA AGCCGAGCGC CTGAAGTTCT GGAGCGGCCG CAAGAATGCA
TTCCCTGCGG CAGGCCGCAT CTCGCCGGAC TATTACTGCA TGGACGGCAC CATCCCGCGC
AAGCACATCG GTACGCTGCT GCGGCGCATC CAGCAGATGG AGCAGAAGTA CGCCCTGCGC
TGCATCAACG TGTTCCACGC GGGCGACGGC AACATGCACC CGCTCATCCT CTTCAACGGC
GAAGACCAGG ACGAATGGCA CCGCGCCGAA CTGTTCGGCT CCGATATCCT CGAGACCTGC
GTGGAACTTG GCGGCACGGT GACGGGCGAA CATGGCGTGG GGGTGGAAAA ACTCAGCTCG
ATGTGCGTGC AGTTCTCGGC CGAAGAGCGC GACGCCTTCC TGCGCGTCAA GGCGGCGTTC
GACCCGGCGC GTTTGCTGAA CCCCGACAAG GCCATCCCCA CGCTCGCGCG CTGTGCCGAA
TACGGCAAGC TGCACGTGCG CAACGGCCTA TTGCCCCACC CCGATCTGCC GCGCTTCTGA
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| Protein sequence | MNAPSSLSAT ARDLTALQAE LTAALSNIVS DDALLWERED TTPYECDGLA AYRQVPLAVV
LPDTEAQVVE ILRVCHRMGV PVVPRGAGTS LSGGAMPTPG GLVLSLAKFK RIIKVDPYTR
TAVVQPGVRN LAISEAANPH GLYYAPDPSS QIACTIGGNV NENSGGVHCL KYGLTVHNVL
RVRAVMMDGE VVEFGSEAPD APGLDLLATV IGSEGMLAVV TEVTVRLIPK PQLAQVIMAS
FDDVESGGNA VADVIAAGII PAGLEMMDKP ATAAVEEFVC AGYDLDAAAI LLCESDGTPE
EVAEEIARMS EVLRASGATR IQVSQSEAER LKFWSGRKNA FPAAGRISPD YYCMDGTIPR
KHIGTLLRRI QQMEQKYALR CINVFHAGDG NMHPLILFNG EDQDEWHRAE LFGSDILETC
VELGGTVTGE HGVGVEKLSS MCVQFSAEER DAFLRVKAAF DPARLLNPDK AIPTLARCAE
YGKLHVRNGL LPHPDLPRF
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