Gene Rpic12D_2356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2356 
Symbol 
ID8020020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2478695 
End bp2479162 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content65% 
IMG OID644831138 
Productputative signal peptide protein 
Protein accessionYP_002982301 
Protein GI241663941 
COG category[R] General function prediction only 
COG ID[COG3895] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0606441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.148323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTT TCGCAACTGC AGTGATGTTC GGGCTGGCGC TGGGCGCCGG CGTCTTCAGC 
GGCGTCGCCA CCGCCCAGCA ATCGCCGGTG CCCGGTATGT CGTCCGACGA TCTGAACACG
GCTCTCGACT TTGCCAAGGC CGGTCTCAAC AAGGCCATCG ATCAGGCGCG TGCGTATTCG
GCGTTGCCGA TCAAAGACCC GCACGACGTG CGCTACACGT GCGAAGGCGG CAAGACACTG
CTCGTGAAAT ACATGACGGT GGGCGACACC CCGCTGGCCG CCATGACGCT CAACGGCAAG
ACGCTGGTCT TTGCCAACGT GATGGCCGCT TCGGGTGCGC GCTATGCGTC GGGCCAGTAT
GTGTGGTGGA CGAAGGGCCC CACCGGCTTC CTCGCCGACG AGACCCTGCC CGGCGGCCGC
AATCAGCTCT ACCGCGATTG CAGCGAAACC ACCAGCGGCC GACCTTAA
 
Protein sequence
MRRFATAVMF GLALGAGVFS GVATAQQSPV PGMSSDDLNT ALDFAKAGLN KAIDQARAYS 
ALPIKDPHDV RYTCEGGKTL LVKYMTVGDT PLAAMTLNGK TLVFANVMAA SGARYASGQY
VWWTKGPTGF LADETLPGGR NQLYRDCSET TSGRP