Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2355 |
Symbol | |
ID | 8020019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2477739 |
End bp | 2478698 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644831137 |
Product | beta-lactamase domain protein |
Protein accession | YP_002982300 |
Protein GI | 241663940 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.104048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.172704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCCT TCGACAACAA CCGTCGCCGC TGGATGCAGC AGGCCGGCGC GCTGGCCGCG GGTGCGGCGT CCGCCGGTTT GCCGCTGCAT GCCCTGGCCG CCGATGCGCC CAAGAAGGGC ACGCGGTTGA TCCTGCTGGG CACGGCAGGC GGGCCCACGC CCAAGAAGAA TCGCTCGGCG CCGGCACAGG TGATCGTCAT CAACGGCGTG TCGTACGTGG TCGATTGCGG CAACGGTGTC GCACGCCAGT ATGTGACGGC GGGCCTCAAG CTCAAGGACA TCCGCCACGT CTTCCTCACG CATCAGCACT CCGACCACAA CGCCGATTAC GGCACGTTGA TGCTGCTGGC GTGGGCCACC GACCTGACCG GCCCCGTTGA CGCCTGGGGC CCGCCCCCGC TGGCCGCCAT GACGACCAAG TTCCTGGAGC TGTACGACTA CGACATCCGC ACCCGCATTG CCGATGAGGG CCGTCCGCCG CTGGCGCCGA TGATTCATCC GCACGAAATC AGCGAAGGCG GGCTGGTCAT GCAGGACGCC AACGTGAAGG TAACGAGCGC GCTGGTCAAG CACCCGCCAG TGTCGCCGGC ATTTGCGTTT CGCTTTGATT CGGCAGACCG GTCCATCGTC ATCTCCGGCG ATACGGCGCC GAGCGAAAAT CTCGTGCGCC TGGCGTACGG CGCCGATGTG CTCGTCCATG AGGTGATGCA CCTGCCGTCG CTCGACAAGC TGCTGTCCAC CGAGCCGAAC GCCAAGACGC TGCGCGAGCA TCTGCTGGCG AGCCACACCT CCACCGAAGA GGTCGGCCGC ATCGCCACCG AGGCCAAGGT GAAGACGCTG GTGCTGTCGC ACTTCGTGCC CGGCGGGTAT CCGTATCTGG AAGATTCAGT CTGGCTCGAT GCCGTACGCC CGCACTTCAA GGGCGAGATC ATCGTCGGGC ACGATCTGCA GGAAATTTAA
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Protein sequence | MHAFDNNRRR WMQQAGALAA GAASAGLPLH ALAADAPKKG TRLILLGTAG GPTPKKNRSA PAQVIVINGV SYVVDCGNGV ARQYVTAGLK LKDIRHVFLT HQHSDHNADY GTLMLLAWAT DLTGPVDAWG PPPLAAMTTK FLELYDYDIR TRIADEGRPP LAPMIHPHEI SEGGLVMQDA NVKVTSALVK HPPVSPAFAF RFDSADRSIV ISGDTAPSEN LVRLAYGADV LVHEVMHLPS LDKLLSTEPN AKTLREHLLA SHTSTEEVGR IATEAKVKTL VLSHFVPGGY PYLEDSVWLD AVRPHFKGEI IVGHDLQEI
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