Gene Rpic12D_2331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2331 
Symbol 
ID8019995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2452322 
End bp2452891 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content67% 
IMG OID644831114 
Productputative endonuclease protein 
Protein accessionYP_002982277 
Protein GI241663917 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.870825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.178627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTGC GCCGCTTCGG TTGGCTGCTG GCCGCATGGC TGGCGTTGGC CGCAGGTGGC 
GTCGCCCTGG CCCGCAGCGC GCCGCCGGTG CAACCCGCCA AGGGCACGGT GCAGGCCGCG
TTCACGCCCG ATGACGACAT CGAAGGATTG TTGGCCGATG CCATCGACCA GGCACGTGAG
CAGGTGCTGG TGCAGGCGTA TCTGCTGTCG GACAAGGCGA TTACGCGTGC ACTGCTGGCG
GCGCATCAGC GTGGCGTGGA TGTGCGCGTG CTGGCCGACC GCGAGCAGAT GACACGCTCC
GGCGGCAGCC GCGTGCCCGA GGTCGCCAAC GCGGGCATCC CCGTCTGGCT GGAGGTGCGC
TACAAGAATG CGCACAACAA GGTCATCGTG ATCGACCCGC GCGGCGCGCA TCCAGTGCTG
GTCACGGGCA GCTTCAACTT CACGCAGACC GCACAGCGCG GCAACGCCGA GAACGTACTG
ATCGTGCGCG GCGACGCCGA TCTCGCCCAG CGCTATGCCG CCAACTGGCA GAAGCATGTG
GGTGACGCAT TGCCCTATCG GACCCAGTAA
 
Protein sequence
MMVRRFGWLL AAWLALAAGG VALARSAPPV QPAKGTVQAA FTPDDDIEGL LADAIDQARE 
QVLVQAYLLS DKAITRALLA AHQRGVDVRV LADREQMTRS GGSRVPEVAN AGIPVWLEVR
YKNAHNKVIV IDPRGAHPVL VTGSFNFTQT AQRGNAENVL IVRGDADLAQ RYAANWQKHV
GDALPYRTQ