Gene Rpic12D_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2243 
Symbol 
ID8019907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2385517 
End bp2386917 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content59% 
IMG OID644831026 
Producthypothetical protein 
Protein accessionYP_002982189 
Protein GI241663829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.707685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCTGC AAAACGACTT CCTTCCGTTC GCCACTGGCG GTTCGGCAAA CGTTCTGACG 
CAAGCGCAAT ACGCTGCACT GATCTCCTCG GTGATCGCAA ATGGCTTTAG TTCTGGCGTC
GCCCAGTCAG CTCAGCTGAA CAAGGTGTGG CGTCAGTCGA GCATCATGGC GGCCGTCCTT
GCTCAGTTGA TCAACAGCAA CGCGGGACAG CCCGCAGTGG ACGACGGCAC GACGGCCACG
CTGCTTGCAA ACCTGACGAC TGCCATCTCG GTGATTGCGC GACAGAATCC GGTCCTCACT
GACACGGGCA CGGCAAATGC CTACGTCGTG TCGAACGCCG CGCCGTTGAC TGCATACCCG
ACGGTGTCTG GCCTGACGAT CGACGTATCG ATCGCAAACA CCAACACAGG CGCCTCGACG
CTCAATGTTG ACGGCTTGGG GACGAAGCCA ATTCTAGGGT TGGGCCTGCA GCCCTTGCAG
GGCAACGAGC TTCCGCAAAA GGGCGTGGCA TGCCTGATGT ATGTCGTGGC TAGCAACGTC
AACGGCGGAA ACGGCGCGTG GATCGTCATG GAGTGCACTG GTGGGGCGCA GCAGGTCGGC
CCCGCTACTC AGAGCCAGCA TGCGGTGCAG CTTGGTCAGC TTGGTCAGGT TGGCCATGGC
CAATGCCGTC TCTCCTACGT CAGCGGCACG CAGCTCAAGC TGTCGCCTTA CAACGGCAAC
AACCTGATCA TCAACGGTGT TCCGCAGCAG ATCCCATCTG CGGGCGTGAC GCTGGCCAAT
ACTGGCCTCG CAGCATCGAC GAAGTATTAC GTCTACGCCT ACATGAATGC GGGCACCATG
ACGTTGGAGG CGGTGACCAC TGCGCATGCC ACAGGTACCA ACGGTGTTGA GCAGAAGTCT
GGCGATGCCA CTCGAACCCT GGTGGGGATG ATTTTGACCG ACGGTTCGAC ACCCGGTCAG
TTCGTCGACA CTCCGGCCAA TCGGCAAATT GCGAACTGGT TCAATCGCCG CATCATCCCC
GGAGTTGCCA CGCTCACCAT CGACACGAAC TTTACTGGAG GATCGTTTGC GAAGGTGACC
ACATCACTGG ATGTGACGTT CCCGTATTGG GGTGACAACG ATGGGGGAAT TGCCTCGCTT
TCTGGATCAG TTGCAAACAA CACGAGCGGA GGTCAGTCCC TACTTGCGGT TTTTGTCGAT
GGCTCGCCTT TTGGTAACAC TGCGAGTGCT TCTGTGTCCG GAAGCACTAT TCAGAACGCG
AGCGTGACAA GTCTCTCTTT GCTCAACAAT GCGGCGCTGA CCGAGGGTTT CCATGTGGCC
TCGGCTTATG GGGCGTCGTC TACAAGTTCC ACGTCAACGC TTCGCGCGTC TACCGTCGTG
ACAGTAAATT CCCGGGCGTA A
 
Protein sequence
MALQNDFLPF ATGGSANVLT QAQYAALISS VIANGFSSGV AQSAQLNKVW RQSSIMAAVL 
AQLINSNAGQ PAVDDGTTAT LLANLTTAIS VIARQNPVLT DTGTANAYVV SNAAPLTAYP
TVSGLTIDVS IANTNTGAST LNVDGLGTKP ILGLGLQPLQ GNELPQKGVA CLMYVVASNV
NGGNGAWIVM ECTGGAQQVG PATQSQHAVQ LGQLGQVGHG QCRLSYVSGT QLKLSPYNGN
NLIINGVPQQ IPSAGVTLAN TGLAASTKYY VYAYMNAGTM TLEAVTTAHA TGTNGVEQKS
GDATRTLVGM ILTDGSTPGQ FVDTPANRQI ANWFNRRIIP GVATLTIDTN FTGGSFAKVT
TSLDVTFPYW GDNDGGIASL SGSVANNTSG GQSLLAVFVD GSPFGNTASA SVSGSTIQNA
SVTSLSLLNN AALTEGFHVA SAYGASSTSS TSTLRASTVV TVNSRA