Gene Rpic12D_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2083 
Symbol 
ID8019744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2226556 
End bp2226927 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content66% 
IMG OID644830867 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_002982032 
Protein GI241663672 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.995495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGCG AGCGTGTGGT CGAGGCCTTG GCCGACATTT CGCCCGACCT CGGCCGCTAC 
GTCGTCGAGT TCGGCTTTGG CGACGTCTAT AGCCGCCCGG GGCTGACGCT GCGTGAGCGC
GAGATCGCCA CCATTGCCGC GCTCACGGCG CTGGGCAACG CGGCACCGCA GTTGAAGGTG
CACATTGCGG CAGGGCTCAA CGTGGGGCTG ACACGCCAGG AGATCACCGA GACGATCCTG
CAGATGGCGC TATACGCGGG TTTTCCGGCG GCACTCAACG GCATGTTTGC CGCCAAGGAA
GTATTTGCCG CTCACGAAGC CGAAGACGTG ACCGCTGCCG GCGGGTCGAT GCGCCGCGAC
ACCAGCAACT GA
 
Protein sequence
MAGERVVEAL ADISPDLGRY VVEFGFGDVY SRPGLTLRER EIATIAALTA LGNAAPQLKV 
HIAAGLNVGL TRQEITETIL QMALYAGFPA ALNGMFAAKE VFAAHEAEDV TAAGGSMRRD
TSN