| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2080 |
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| Symbol | |
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| ID | 8019741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2217958 |
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| End bp | 2221989 |
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| Gene Length | 4032 bp |
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| Protein Length | 1343 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830865 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_002982030 |
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| Protein GI | 241663670 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTCTG CTGACCTGAC TCCGCGTGAA CGGCTGCTGC CAGCCTGGCT GATCGGTACC
CTGGGTGCAC TGATCGGGCT TGCGCTCGCC TTGATGTTCC CCCGCGAGCG CCTTGAGGCG
CGCTTGCTGG AGGGCGGCAA GGTCGATGCG CTGTCGGTGG CCTACCTGGA AGCCTGGCTG
CGCGTGCGTC CGAACGATGG CGAGTTCCTG AGCGTGCTGG CCGCACAGTA CGTTCGCACC
GGCCGCTTGC CGGAAGCCGA AGCCATGGTT GCTCGCATGC GTGCGCTGCA CGACAAGACG
CTCGACCGTG AAGCGCTGCT GCTTGACATC GCGATCCGAG AGCAACGCGC ATACGCGCTG
CAACCGAACG ATCCCCAACG CGCCGCCATG CTGCTTGACC TGCGTGGCCT GCTCAAGCAG
GCGCTGGACT ATCGCTGGAC CGCGGCCGAA CTGGAGATGC TCGCCGCCAA GTCGCGTGGC
TTGGACCAGG GCGCGATTGC TGTCCAGTTC TATCAACGCC TGGCTAAACA GGACGTGGCG
CGTGCCGCGC AATGGCAGGC GCGTACTGCC GAGATCGCAC TGGGCGTGGG CGAATACCGC
GCCGCTGCGG CTGCCAACTT TGCCGCGCAG GCCACAGCCA CCTCGCTCGA CGAACAGCGC
CGCTACTTCA TCGCAGGGTT GAAGGCATTG CAGTCCGGCA ACCTGCTTGA CGATGCCATG
ACGGAAGCGC AGCGCCGCGT TGGCCCGCTG ATCGACGATA CCGAAACGCT GCGCTTTCTC
ACGCGCCTGG CGATGGCATG CAATCGGCCG GATCTGGCAG ACCAATACGC GCGCCGCCTG
CTGCGGCTGT CCAGGTATCA GGCGCAGGAG CGTGTTGCCT TGGCCTCCGG CGTCGGCCGG
CATGACTGGG CATTCGCCGG CCGGCCTGAG CCGTTGCCAA GTCCGGCAGA CCTGGTGTTC
ATGGACGGCC CGGAAGGTCT GGCGCGTCGC CAGCGCTACG CTGCGCGCAT TCGCCCGGTG
GCGGATAAAC AGGACAAGGC TGGCGATGCT GCTTCGTCTG CGCAGCCATC TGGCGCACAG
GCGATCGCAC GTGGGATTGC GCCATTCAAT GCGGAAGATT ACGACCTCGC ATTCCAGGTT
TTCATGGGCA GCGGCAATCT GAACGACGCC ATGCGCGTGG CCGAGGCCGC TGTGCGTCAA
CGCCCCGATC TGAAAATCTG GACCGAACGT GCCGCGCAAG TGGCTGAGTG GAACCGGCAA
CCGATGGCGG CGCTGAACTA CTGGCTGGCG TATGCGCAGT CCACTGGGGA TGATGCCGCC
TGGCACCATG TGTTGCGTCT GGCGCCCGCG CTCAATGAAG ACCACGCCTA TCTGGCAGCG
TTGCGCTACC AGGCAAGCCG CAACCCGGGC GACATGAAGC TGCTCGACCA GGTTATCGCG
GCCTACGAGC GCCTGGGTGA ACCCGTGCAA GGGCTGGCGT ATCTGGACAG CATCGCGCAC
GGTCCGCATC GGCAAGTGGT GCTGGAGCGC TATGCCAATC TGGCCGAGCG CGCAGGCAAA
GACGAGCCGG CCTACGACAC CTACGTGCGT TTGCAGAAGG AGTTCGGCCC CAACGCGCGG
TACGCGCTCA AGCTGGCGAA CATCCTGTAC GTGCGCGGAC AGTTCGCCCA GGCCCTTGCT
GCCATGCAGG CTGCGGACAA GACGGCCTCG CCAACCGATG ACCTGTATTG GCGGACCTTC
GCCCAGCTCG CGCGCCTGAA CCAGCGTGAC GATCTGTCGC GTGCGGCGTA TCGACAGTTG
CTGATCGGCG GCAGGGCTGA GCCAGACGAT CTGACAACGA TGATCGACTT CTACGACGCC
AGCCCCATCG ACGCGGGTCG CCTGGCTGAA CTCGCGTTCC GGAAGGCGGG CACGATGGTT
CATCTGCAGC AGGCCATCTA CTACTACACG CGTGCGCGTT CCTTCCGCCG CATCGAGGGG
CTGCTGGCCT CGCTCACGCC AGAGCAGCGC AGAGCGGCCG AACAATCTGC CGGCGTGCTG
GGCGCCCGCG CCGAATATTT CCGTCAGAGC GGTCAGTGGG ATGCCGCCAT GCGCGACCTG
CGGCGCGCGG TGTCGCTGCC TGACGCGGGT AGCGATGTGA AGGCCGCCTT CCTGTGGGGT
CTGCTGGATT CCGGCCAGAA CGCCGAACTC AAGCGCGCAT TGGCGCTTTG GCGTAACGAG
GCCGAAAACG ATTCCGCATA TTGGGGAGCC TACGCTGCAG CCGGCCTGCA GCTGTTCGAC
GCCAACCTTG CGCTGCGCTA CCTGGGCCGC CAGAGCAAGT CGATGCAGAC CGATCCGCTC
TGGCTGCTGG CCTATGCCGA CGCACGCGAA ATGGCCGGTC AGGCCGATGC TGCCTGGGCG
CTGCGCCGCG AGGCGTGGTG GCTGTTGTGG CGTGCTGAAG ACTCGACAGG TACCGGCAAG
ACCAAGCTGC CAACGGGCCG CCGCGCAGGC ACACGCGTCG CGGTGGGCGA TGCCGATGCG
GCACCGCTGG AAGAAGATGC CCGTGCGGAA TTGCGTGCCC GGCGCGTCTC ACTGGCTCAA
ACCTTTGGCT CTGGCGACCT GTCGCAGCGC CTGCTGATCG AATTGCTGCG CGATGATCGC
CGCGCCACGA AGCTGGCCCG CGAAGGTGGC CGCTCGGCGA TCGATAAGTC CGAGTTGGGC
GATATCGATA CGTTGCCGCC CGAGCCGCCG CAGCTTCCCA CCGACAAGCG CAAGAACGCC
CGCGTGAGCG ACCAGCTTGT CTCTGCCGTG GCCAAGGAAG CGGCGCTGGG CTGGGCGCTG
TCTCAGGAGG CGAACGATCT GGCGCGCGCG TGGCTGCTGC AGCAGTACAC GCGCCGCATG
ACGCGCCCGG CCTATGCCGA GATTTCCATC GCCCTGGCCG AGCGCGATCT GCAGACGCTC
AACCGCTTGC TGGACGACAC GCCTGACCGT ATTCCGCTCT ACAACCGCAT CGATGCGAAT
GTGATGACGG ACCGCCTCGG CGAGGCGCAG CGGTTGTCGT TTGAAGGGCT GAGCACCGCG
CCCGATGACG AGCAGCTGCA CGAACGTGTG CAGGAGACGC TGCTGACCAA TGCACAGGCG
TTGGAGCCAC GCGAGACGTG GTTCAAGCAG GCGCCCCTCA CGTACTTCGA GACCAGCGCC
GCCGCTGGCA TCCGCCTGAC CGATCACTAC AGCATGCTCG TGCGCGCCAC CCAACGGAAC
CAGCGCTCGA CCGACGACAC GCAGTTGACC GGCGTGCCTG CGCAGGACCG GCAGGTGGAT
TGGATCTCGC AGTACCAGAC GCAGAACGCG CAGTGGAAGG GCACGGTGGG TTGGCGCCAG
GGGCTGGCCT CAATTTACGC GTTCCGGCTG GATGGTCTGC TTGGGCAGGT TGGGCCAGTG
GGCACGGAAC TGTCGATCGG TCGCAACCAG CCGGCCAATG AAACGCCGCA ACTGCGTGTG
GGCGGCGTGA AGGATCTTTT TTCGATCGGC AACAATTGGC GGGTGACGCA GAACGAATAC
GTGCGCGCTC GCGTGGAAGG AAACCGTTTC TACGGGCAGG ATCGCTCGTT CCTCGGCAGC
GGCATGGTGT TCGATGGCGA AATCGGCCAC CGCTTCCGGG TGGAATATCC GGACTACACG
GTCCGCGTGG TCGGTACCGT CGCGCGCTAC AACGCGACGG GCACGGTCAG CCCCTTGATG
GCGCGCCTCC TTCCTTCGGG CGCTGCACTG GACGTCGACC AGATCATGCC GCGTTCGTTC
AACCAGTTTG GCATGCTGTT TGGCTTCGGC ACGGATTATC TGGACCGCTA TACGCGCGCC
TGGCGGCCCT TCATGGATGC AGGCATGCTG CATGACAACC GCGAAGGGTG GGGTGTGCAG
GCCCAGCTTG GCGTGGCCGG CAGCGTATTC GGCAACGACC ACCTGGCGCT GTACTTCGAA
CACCAGTCGA TTACGCGCGC GGGTACATCG CCGCTGACGG AGATCGGTCT GCGCTACCGC
TGGCTTTACT GA
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| Protein sequence | MWSADLTPRE RLLPAWLIGT LGALIGLALA LMFPRERLEA RLLEGGKVDA LSVAYLEAWL
RVRPNDGEFL SVLAAQYVRT GRLPEAEAMV ARMRALHDKT LDREALLLDI AIREQRAYAL
QPNDPQRAAM LLDLRGLLKQ ALDYRWTAAE LEMLAAKSRG LDQGAIAVQF YQRLAKQDVA
RAAQWQARTA EIALGVGEYR AAAAANFAAQ ATATSLDEQR RYFIAGLKAL QSGNLLDDAM
TEAQRRVGPL IDDTETLRFL TRLAMACNRP DLADQYARRL LRLSRYQAQE RVALASGVGR
HDWAFAGRPE PLPSPADLVF MDGPEGLARR QRYAARIRPV ADKQDKAGDA ASSAQPSGAQ
AIARGIAPFN AEDYDLAFQV FMGSGNLNDA MRVAEAAVRQ RPDLKIWTER AAQVAEWNRQ
PMAALNYWLA YAQSTGDDAA WHHVLRLAPA LNEDHAYLAA LRYQASRNPG DMKLLDQVIA
AYERLGEPVQ GLAYLDSIAH GPHRQVVLER YANLAERAGK DEPAYDTYVR LQKEFGPNAR
YALKLANILY VRGQFAQALA AMQAADKTAS PTDDLYWRTF AQLARLNQRD DLSRAAYRQL
LIGGRAEPDD LTTMIDFYDA SPIDAGRLAE LAFRKAGTMV HLQQAIYYYT RARSFRRIEG
LLASLTPEQR RAAEQSAGVL GARAEYFRQS GQWDAAMRDL RRAVSLPDAG SDVKAAFLWG
LLDSGQNAEL KRALALWRNE AENDSAYWGA YAAAGLQLFD ANLALRYLGR QSKSMQTDPL
WLLAYADARE MAGQADAAWA LRREAWWLLW RAEDSTGTGK TKLPTGRRAG TRVAVGDADA
APLEEDARAE LRARRVSLAQ TFGSGDLSQR LLIELLRDDR RATKLAREGG RSAIDKSELG
DIDTLPPEPP QLPTDKRKNA RVSDQLVSAV AKEAALGWAL SQEANDLARA WLLQQYTRRM
TRPAYAEISI ALAERDLQTL NRLLDDTPDR IPLYNRIDAN VMTDRLGEAQ RLSFEGLSTA
PDDEQLHERV QETLLTNAQA LEPRETWFKQ APLTYFETSA AAGIRLTDHY SMLVRATQRN
QRSTDDTQLT GVPAQDRQVD WISQYQTQNA QWKGTVGWRQ GLASIYAFRL DGLLGQVGPV
GTELSIGRNQ PANETPQLRV GGVKDLFSIG NNWRVTQNEY VRARVEGNRF YGQDRSFLGS
GMVFDGEIGH RFRVEYPDYT VRVVGTVARY NATGTVSPLM ARLLPSGAAL DVDQIMPRSF
NQFGMLFGFG TDYLDRYTRA WRPFMDAGML HDNREGWGVQ AQLGVAGSVF GNDHLALYFE
HQSITRAGTS PLTEIGLRYR WLY
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