| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1998 |
|---|
| Symbol | |
|---|
| ID | 8019658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2122646 |
|---|
| End bp | 2124130 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644830784 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_002981950 |
|---|
| Protein GI | 241663590 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.391901 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA CGAATGTTGC CCCGCTGGAT GCGGCCCACA CCATTGCGAT GCTGATTAAC
GGAGAGCGCG TGCAAGCCGC CAATGGTGCC GTGTTCGAGC GGCGCAATCC GCTTGACGGC
ACTGTCGCTA CGCGCGCGCC AGCGGCAACG TCGGAGGATG CCCGTCGCGC AGTCGATGCC
GCCGCTGCTG CATTCCCGGC ATGGGCTGCA ATGGGACCGA CAGAGCGCCG TGCGTTGCTC
ATGCGCGCTG CCCAGGCACT TGAGGCGAAG GGCGACGCTT TTGCCGCCGC GATGGCTGCT
GAAACGGGCG CCTCCGCGCT GTGGGCCGGC TTCAATGTGC ATCTTGCTGC GAGCGGTCTG
CAGGAAGCCG CGGCCATGGT CACGCAGATC GCGGGCGAGA TCATTCCGTC CGACGTGCCG
GGCAGCCTCG CCATGGGTGT GCGCCAGCCG GCCGGCGTGG TGCTCGGAAT TGCTCCATGG
AATGCGCCGG TCATCCTCGC CGTGCGGGCG ATTGCGCTGC CGCTGGCATG CGGCAACACC
GTCGTGCTCA AGGGCTCGGA AGTTTCGCCC GCCACGCACG GGCTCATCAT CGAAGCCTTG
CAAGAGGCGG GCTTGCCAAA CGGCGTCGTC AATTTTGTGA CGAATGCCCC GGCCGACGCC
GGCGTGATCG TAGAGGCGAT GATCGCGCAC CCCGCCGTGC GGCGCGTCAA CTTTACCGGC
TCAACACGTG TGGGCCGCAT CATCGCGCAG ACGTGCGCGA CGTATCTGAA ACCTGTGGTG
CTGGAACTGG GCGGCAAGGC GCCGCTGTTG GTGTTGGCGG ATGCTGACAT CGACGCCGCT
GTCGACGGCG CGGCCTTCGG CGCGTTTGCC AATTCGGGCC AGATCTGCAT GTCCACCGAG
CGCATCATCG TCGATGAATC CATCGCCGAT GCATTTGTCG CCAGGCTGGC GGCTAAGGCT
GCGGCGCTGC CGCTTGGCGA TCCGCGCAAG GGGCCGGCAG TGCTGGGCTC GGTGGTCGAC
ATGAGTACGG TCGAACGCTG CAATCACCTC ATCGACGACG CGCTCGTCAA AGGCGCGAAG
CTGCTGTGCG GCGGCAAGGC CACCAGTACG CTGATGCCCG CCACGCTTCT CGACCACGTG
ACGCCCGACA TGCTGATCTA CTCAGAAGAA TCATTCGGCC CCGTCAAGGG CATCGTGCGT
GTGAACGGCG ACGATGCCGC CGTTGCCTGT GCGAATGACA ACGCATACGG CTTGTCGTCC
GCCGTGTTCA GCCGCGATGT CGCCCGCGCC ATGAACGTCG CGCGCCGCAT CGAATCCGGC
ATCTGCCACA TCAACGGTCC GACCGTGCAC GACGAGGCGC AGATGCCGTT TGGCGGCGTC
AAGGCAAGCG GCTTCGGGCG GTTCGGCGGC CGCGCCGGTG TGGCCGAGTT CACCGAGCTG
CGCTGGATGA CGGTGCAGAC CACGCCGCGC CACTACCCGT TCTGA
|
|---|
| Protein sequence | MTNTNVAPLD AAHTIAMLIN GERVQAANGA VFERRNPLDG TVATRAPAAT SEDARRAVDA
AAAAFPAWAA MGPTERRALL MRAAQALEAK GDAFAAAMAA ETGASALWAG FNVHLAASGL
QEAAAMVTQI AGEIIPSDVP GSLAMGVRQP AGVVLGIAPW NAPVILAVRA IALPLACGNT
VVLKGSEVSP ATHGLIIEAL QEAGLPNGVV NFVTNAPADA GVIVEAMIAH PAVRRVNFTG
STRVGRIIAQ TCATYLKPVV LELGGKAPLL VLADADIDAA VDGAAFGAFA NSGQICMSTE
RIIVDESIAD AFVARLAAKA AALPLGDPRK GPAVLGSVVD MSTVERCNHL IDDALVKGAK
LLCGGKATST LMPATLLDHV TPDMLIYSEE SFGPVKGIVR VNGDDAAVAC ANDNAYGLSS
AVFSRDVARA MNVARRIESG ICHINGPTVH DEAQMPFGGV KASGFGRFGG RAGVAEFTEL
RWMTVQTTPR HYPF
|
|---|
| |