Gene Rpic12D_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1910 
Symbol 
ID8019567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2027260 
End bp2028276 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content67% 
IMG OID644830694 
ProductPGAP1 family protein 
Protein accessionYP_002981863 
Protein GI241663503 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.463878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACG CCGATCTTCC AGCCTCCCCT GTTCCTTTCG CCTCCCTGAC CGCCGCCACT 
GTGCGCCGCA TTGCCGTTGC GCTGCAATGT GCCGCGACGA TCGCGGTCGG CTGGGCAGCG
CATGACTGGG CGGGATGGCA TTGGCCGGCC GCAACGTTGC TCGCGGGCGC GGCGCTGGTG
CTGGGCTATC TTCTTTCGGT CGGATGGGCA TTCCTGGTGT CGCTGACGAG CCTCGGTACG
GCGATACCGG ACGACCCCAT GTGGGACCGC ATGCCCGTGC CCTGCGAACA GCGCATCGGC
GTCACTGGCT TCATCGCATG TTGGTTGCGC GAATGTGTAT CCGTGGCGTG GATGTTCAAC
GTGCTGCAAC CGTTCCGAGC ACGCGCCGCG TTCGATACGC CGGCGGGTGA TGGCAAGCGC
GTGCCTGTGC TGATGATCCA CGGCTATGGC TGCAACCACG CGGTGTGGCT GCCGATGCAG
CAGCATCTGG CCGCCGCCGG ACATCCGACC GACGCCATCG ATCTCATGCC GTTGCTGGGC
GACATCGACG ACTACGCCCG GGACATGACG GCCGCTGTCG CGCGCCTGAC GCGCATGCAC
GGCCGTGCGC CCGTTCTGCT CTGCCACAGC ATGGGCGGGC TTGCCGCACG TGCGCTGCTG
CGCCAGTCGC AGCCCTGCCC TGTCGCCCAC GTCATTACGC TCGGCACGCC GCATCGGGGC
ACGGCAATGG CGCGCACGGG ACGCGGCCAC AATGTGCGCC AGATGGCTTG GGCGAGCCCT
TGGCTGCGCC AGCTTGCAGC ATCCGAAACG CCGGCCTCCC GAGCACGCAT CACGTCGATT
TTCTCGTGGC ACGACTCCAT CGTCGGCCCG GCTGGCGCAT CCTGGCTGGA AGGCGCGCGA
CACATCCCGT TCGCGGGCAT CGGCCATGTG TCGCTGTTAT GCGACGCACG CGTGCGTGAT
GCCGTGCTGG CAGAACTCGC ACGCATCGAA GGCGTCTCTG CGATCCCTTC TGCTTGA
 
Protein sequence
MTHADLPASP VPFASLTAAT VRRIAVALQC AATIAVGWAA HDWAGWHWPA ATLLAGAALV 
LGYLLSVGWA FLVSLTSLGT AIPDDPMWDR MPVPCEQRIG VTGFIACWLR ECVSVAWMFN
VLQPFRARAA FDTPAGDGKR VPVLMIHGYG CNHAVWLPMQ QHLAAAGHPT DAIDLMPLLG
DIDDYARDMT AAVARLTRMH GRAPVLLCHS MGGLAARALL RQSQPCPVAH VITLGTPHRG
TAMARTGRGH NVRQMAWASP WLRQLAASET PASRARITSI FSWHDSIVGP AGASWLEGAR
HIPFAGIGHV SLLCDARVRD AVLAELARIE GVSAIPSA