Gene Rpic12D_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1859 
Symbol 
ID8019515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1976769 
End bp1977458 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID644830642 
ProductUrease accessory protein UreF 
Protein accessionYP_002981812 
Protein GI241663452 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.148323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACG CGGCGCAGCT CACCGCCTTG CTGCATCTTG CGTCCCCGGC GCTGCCGGTG 
GGCGCGTTCA GCTATTCGCA GGGGCTGGAA GCGGCGGTGG ACGTCCGGCA CGTGGCCGAT
GAGGCGTCGG CTGCGGCGTG GATTGCCGAG GGTCTCGACG TGCTGGCCGC CTGCGAGGCA
CCGCTGTGGC TGCTGCAGTT TGCCGACTGG CAGGCGGGCC GCTTCGATGC CGTGGCCGAG
CGCGATGCGT GGTTTCTCGC CACCCGCGAG ACGCGCGAGC TGCGGCTCGA AACGTCTCAG
ATGGGCTGGT CGCTCAATCG CCTTATCCAG CAGTTGGAAT GGGGCGATGC CGCACTGCGC
AGCGCATTGG CTGCGCGCGC TTTCGTGACG TTTCCGACGG CCTTTGCCGC CGCCGCTGCC
GCGCTGAATG TCGACCCGCG CGATGGGGTG ACGGCGTACT GCTTTGCCTG GGTGGAAAAC
CAGATGGCGG CGGCGGTCAA GGCCGTGCCG CTCGGGCAGG CTGCGGGGCA GCGCATTCTC
TTCGGTCTGC ACACTGCGGT GGCCCGTGCG GTGGAAGAGG CCACGCGTCG TGCGGCATCT
CATCCGCCCG AACTGTCTAC GTTTTCACCG GGGCTGGGCG TGTTGTCCGC CCGGCATGAA
ACGCAATATT CACGACTCTT TCGATCCTGA
 
Protein sequence
MTNAAQLTAL LHLASPALPV GAFSYSQGLE AAVDVRHVAD EASAAAWIAE GLDVLAACEA 
PLWLLQFADW QAGRFDAVAE RDAWFLATRE TRELRLETSQ MGWSLNRLIQ QLEWGDAALR
SALAARAFVT FPTAFAAAAA ALNVDPRDGV TAYCFAWVEN QMAAAVKAVP LGQAAGQRIL
FGLHTAVARA VEEATRRAAS HPPELSTFSP GLGVLSARHE TQYSRLFRS