| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1672 |
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| Symbol | |
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| ID | 8019325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1774621 |
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| End bp | 1775916 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830454 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_002981627 |
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| Protein GI | 241663267 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00303989 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAGTC AACCACAATC CAAGAACCCC TTGCTCCGGC TTGCCCAGCC TTTGTTCTGG
CTGCTGGACG AACTGTCTCC CGAGCTGGAG TCGGCGGCCC GCCTGGATGC GCTCAAATCT
GAAGTGCGCA CGCGACTGGC CGCCTTTAAA CAAGCAGCCC AGGCAGCCGC GCTCAAGGCG
GATTCTGTAG AGGCGGTGCA TTACTGCTTC TGCGCGGCCC TGGATCAGGC GGGTAGCCGC
GTGCGTGGGC GCGCGGATGG CTTGCGCGGT GTTTGGCTTC ACCACGGCTT GCTGATGCAG
CTCTATGGCG AGAAGGATTT TGGTCAACGC TGCCGCTCCT GGATCACCAA GCTGCAGGAG
ACACCCAACG CCAGCGAGAA TGCGCTGGGG GTAATTGCGC AACTCATGGA GCGTGGCTTG
CGGGACGAGC GGGGCATGCC GCTTCCCAAA ATCCAGCTTG TGCACCAATG GAGCCCCGTG
GAGGTCATCC CGTCAGCCGC GACGACTCCG CAGCGCCGAC ACGTGACGAT TGCCAATTCG
GCGGCCGAGC ACCAGCGCAT TCATGTTGCC GTCAGTAATC CTAGCGGTGG TGCGGTAGAA
CCATCGGATG TGCTGATCAC CGTCGGCATG CCCGTGCAAG AGGCAGCGCC GTCCCAAGAG
CTGTCACCCC AGCGCTCATG GCGCCTGATC GTGATAGCAG TGGTGGTGAC GGCGCTTGTT
ATTGGCCTTG CATGGGTGAC CTATCGCCAG CATCTCGACA ACCAGGCGCT GGCAAGCCAA
GTCAGTGCGC TGGAGGCACA GGTCGCCAAG CGGCAGGAAC CCCTAGAAGA CCGCATCGCT
CGTGCGTTGA CCTCGGAAAC CGGGGCCAGC CAGTTTGGCT TGAGCACCGA AGGCGACCGC
ATTTACATCG TCTTCAGCAG CGGCATGGGT TTTGCTGCTG GCAGCGCCGA CATTACGCCG
ATGCTAGCGC GCCAGCTTGA ACGCCTCGCT GGCGTACTCA CCACCGATGG CAAGGTGACG
ATCGTGGGGC ATACCGACGA TTCGCCCGGT GCGCGCGGCC GCACGGAAAC CAATCTGGCC
CTGTCGGCTG CCCGCGCCAT GGCAGTGGGG CGCAATCTGC AGGCGCATGG CTTGTCGGAG
ACTCGTTTGT CAACCATGGG CCGAGGTGCA AAGGAGCCCG TTGGCGACAA CAAGACTGCA
GAGGGCAGGG CGTTGAATCG GCGTGTGGAA ATCGTACTCG ATCGCCAACG CGCTTCGGTT
CCTGAGAGAG CTAGTCCAAC CACCGCCGGC GACTAA
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| Protein sequence | MASQPQSKNP LLRLAQPLFW LLDELSPELE SAARLDALKS EVRTRLAAFK QAAQAAALKA
DSVEAVHYCF CAALDQAGSR VRGRADGLRG VWLHHGLLMQ LYGEKDFGQR CRSWITKLQE
TPNASENALG VIAQLMERGL RDERGMPLPK IQLVHQWSPV EVIPSAATTP QRRHVTIANS
AAEHQRIHVA VSNPSGGAVE PSDVLITVGM PVQEAAPSQE LSPQRSWRLI VIAVVVTALV
IGLAWVTYRQ HLDNQALASQ VSALEAQVAK RQEPLEDRIA RALTSETGAS QFGLSTEGDR
IYIVFSSGMG FAAGSADITP MLARQLERLA GVLTTDGKVT IVGHTDDSPG ARGRTETNLA
LSAARAMAVG RNLQAHGLSE TRLSTMGRGA KEPVGDNKTA EGRALNRRVE IVLDRQRASV
PERASPTTAG D
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