| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1468 |
|---|
| Symbol | |
|---|
| ID | 8019113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1549693 |
|---|
| End bp | 1550733 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644830246 |
|---|
| Product | folate-binding protein YgfZ |
|---|
| Protein accession | YP_002981427 |
|---|
| Protein GI | 241663067 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
|---|
| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.606747 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0230828 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATG TCTTCCACGA TTTTGTCGAT ACGCTGAGCT TTCCGCCGCT CGACGTGCAA
TTTGATTCCG CCACGCACGG CAGCGTGCTG TGCGCTCCGA CCGATCTGGC CCGCATTGCC
GTTGAAGGCG CCGATGCCGC CGAGTTTCTC CACAACCAGC TGACCAACGC CGTGACCGGC
CTGGGCCTGA ACCAGGCGCG CCTGGCGGGT TATTGTTCGC CCAAGGGTCG GCTGCTGGCC
ACGCTGCTGG TGTGGCGTCA GGCCGATACG ATCGTGCTTC AGACAGACAA GGCGATCGCT
CCGGCGCTGA CCAAGCGCTT GTCGATGTTT GTGCTGCGCG CCAAGGCCAA GCTGCGCCCG
ATGGATGAAT TCATCGCCAT CGGCGTCGCC GGGCCCGAAG CAGCGGACGC GCTGCGCGAG
GCCGGTGCCG TGTTGCCTGA ACCGGATACC GTCAACGCGG TGGCCCAGCA GCCTGCCACG
GTGGGGCAGC AATTTGGCGC CGTCGTCCGT CTGCCGGATG CCGGCGGCCG CCCGCGCTAT
CAATGGATGG TGCATGCCGA GCACTTTCAG CACGCCTGGA AGACGCTGTC GTCGCGCCTG
TCGCTGGTCG GTACCGAGGT GTGGGATTGG CTGAGCCTGC AAGCGGGTGT GCCGCACATC
ACCCTGCCCA CGCAGGAACA GTTTGTCCCC CAGATGGTCA ACCTCGAATT GCTGGGCGGC
GTCGATTTCC GCAAAGGCTG CTACCCGGGG CAGGAAGTCG TGGCGCGCAG TCAGTATCGC
GGCACGCTCA AGCGGCGCAT GCAGCGCGCG CATGTGAATG CCCCCACGTC GGCCGGTGCC
GAGGTCTACA GCGCAGCCGA TCCCAACCAA CCGTGCGGCA TGGTGGTCAA CGCAGCCATG
GCGCCCGACG GCGGGACCGA CCTGCTCGTC GAGTTGAAGC TGGACGCCCT CGACACCGTC
ATCCACCTGG CCACGCCCGA CGGCCCGGTG CTGACGTTGC AAGAACTGCC GTACGTCATT
CCCGTTTCAG AAAACGCCTG A
|
|---|
| Protein sequence | MNDVFHDFVD TLSFPPLDVQ FDSATHGSVL CAPTDLARIA VEGADAAEFL HNQLTNAVTG
LGLNQARLAG YCSPKGRLLA TLLVWRQADT IVLQTDKAIA PALTKRLSMF VLRAKAKLRP
MDEFIAIGVA GPEAADALRE AGAVLPEPDT VNAVAQQPAT VGQQFGAVVR LPDAGGRPRY
QWMVHAEHFQ HAWKTLSSRL SLVGTEVWDW LSLQAGVPHI TLPTQEQFVP QMVNLELLGG
VDFRKGCYPG QEVVARSQYR GTLKRRMQRA HVNAPTSAGA EVYSAADPNQ PCGMVVNAAM
APDGGTDLLV ELKLDALDTV IHLATPDGPV LTLQELPYVI PVSENA
|
|---|
| |