| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1424 |
|---|
| Symbol | |
|---|
| ID | 8019069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1506740 |
|---|
| End bp | 1507651 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830203 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002981384 |
|---|
| Protein GI | 241663024 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.442699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGC GCCACCTTCG CTACTTCGTT GCCGTCGCTG AAGAGCTGAA CTTCACCCGT
GCCGCTGAAC GGCTGCACAT CGCGCAGCCG CCACTCTCGC GGCAGATTCA GCAGTTGGAA
GAGGAAGTCG GCGTGCGGTT GTTCGAGCGC GGCAGCCGCC CGCTCAAGCT GACCGAAGCC
GGCCGCTTCT TTCACGCGCA CGCGCGGCAA CTGCTCGCGC AAACGGCCGA ACTCGCCTCG
ATGACACAGC GCGTCGGCCA GATCGAGCGG CGCCTGTCTA TCGGCTTCGT GGCATCAACG
CTGTATGGGA TGCTGCCGAA GGTCATCCGG CGCTTTCGCG CGGAGTACCC GATGGTCGAT
CTGACCATGC ACGAGATGAC GACCATGGAC CAGATCCAGG CGCTCAAGGA CGGCCGCATC
GATGTCGGGT TTGGCCGCAT ACGCTATGAA GATCCAAACG TGCGACGCAT CCTGCTGCGC
GACGAACGGT TGATCGTCGC CTTGCCTTCG GGCCATGCGC TGCTGGGCGC CAAGCCAACG
GTATCCCTGC GCGACCTTGT CGGCGACACG CTCATCATCT ATCCGCGCAC ACCGCGTCCG
AGCTATGCCG ATCAGGTGCT CGCCCTCTTC CACGATCGCG CGCTGGAACC CAGCAAGATC
TATGAGGCAC GGGAATTGCA AATTGCCCTG GGGTTGGTTG CCGCGGGCGA AGGCGTGTCA
GTGGTGCCGC GCAGTGTGGC GGGCCTGCGG CGCGAAGATG TCTGCTACAT GGAACTCGAC
GATCCGCAAT TGGTCTCGCC CATTATCTTC AGCACGCGGC TGCTCGACGA GTCTGAAGAC
ATTCAGGCCA TGCTGGCGCT GACGTACCGG TTGTACGACG AGCAGAACAT CCCGTATTAC
GCGCCCTCGT AA
|
|---|
| Protein sequence | MELRHLRYFV AVAEELNFTR AAERLHIAQP PLSRQIQQLE EEVGVRLFER GSRPLKLTEA
GRFFHAHARQ LLAQTAELAS MTQRVGQIER RLSIGFVAST LYGMLPKVIR RFRAEYPMVD
LTMHEMTTMD QIQALKDGRI DVGFGRIRYE DPNVRRILLR DERLIVALPS GHALLGAKPT
VSLRDLVGDT LIIYPRTPRP SYADQVLALF HDRALEPSKI YEARELQIAL GLVAAGEGVS
VVPRSVAGLR REDVCYMELD DPQLVSPIIF STRLLDESED IQAMLALTYR LYDEQNIPYY
APS
|
|---|
| |