Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1410 |
Symbol | |
ID | 8019055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1489944 |
End bp | 1490666 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830189 |
Product | MgtC/SapB transporter |
Protein accession | YP_002981370 |
Protein GI | 241663010 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000273538 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.129974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGC AAGCCCTCGC CCATCTCAAT ATCGCCACGC TGGTGGATTC ATTCCTCAGC CTTGCCTCGG CCTTTGCGCT CGGGTCGCTG ATCGGCTTCG AACGGCAGGT CAGACAGCGG ACTGCGGGGC TGCGCACCAA TGCCCTGGTG GCGGTGGCGG CATCGGCGTT CGTCGATATG GCGGCGCAGA TCGGCACCGC ATCGGACACC ACCCGCGTGA TCGCCTATGT GGTGTCGGGC GTCGGCTTTC TGGGGGCCGG CACCATCATG AAGGAAGGGC TGAACGTGCG CGGGCTGAAC ACCGCCGCCA CGCTCTGGGG CTCCGCCGCT GTGGGTGCGG CGACCGGCTC CGATCTCATT GGGCAGGCCA TTCTCATTAC GCTGTTCGTG CTGGCCTCGA ACATCCTGCT GCGGCCGGTG GTGGATCGCA TCAACCGCAC GCCGCTGGAC AACCAGGCGA GCGAAGTCAC GTACACCATG TGCGTCATCT CGACCAGCGA ACGCCAGAAG GAGGCACTTG CCGATCTGGA ACGCCTGCTC GAAGAAGCGA GCTACCCGAT CAGCGATCTG TCGGTCGAAC CCTTTGGCGA CGACCACGTG GAAATTGAAG CCATGCTGAT GTCGACCGCC GTGAACGCAT CCGAGCTGGA CCGCATCGTG GCGTCGCTGC AATCGCAGCC GCACGTGGCG CAGGCGTTCT GGAATCCGAG TACGACCGAA TAA
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Protein sequence | MTLQALAHLN IATLVDSFLS LASAFALGSL IGFERQVRQR TAGLRTNALV AVAASAFVDM AAQIGTASDT TRVIAYVVSG VGFLGAGTIM KEGLNVRGLN TAATLWGSAA VGAATGSDLI GQAILITLFV LASNILLRPV VDRINRTPLD NQASEVTYTM CVISTSERQK EALADLERLL EEASYPISDL SVEPFGDDHV EIEAMLMSTA VNASELDRIV ASLQSQPHVA QAFWNPSTTE
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