Gene Rpic12D_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1410 
Symbol 
ID8019055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1489944 
End bp1490666 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID644830189 
ProductMgtC/SapB transporter 
Protein accessionYP_002981370 
Protein GI241663010 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000273538 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.129974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGC AAGCCCTCGC CCATCTCAAT ATCGCCACGC TGGTGGATTC ATTCCTCAGC 
CTTGCCTCGG CCTTTGCGCT CGGGTCGCTG ATCGGCTTCG AACGGCAGGT CAGACAGCGG
ACTGCGGGGC TGCGCACCAA TGCCCTGGTG GCGGTGGCGG CATCGGCGTT CGTCGATATG
GCGGCGCAGA TCGGCACCGC ATCGGACACC ACCCGCGTGA TCGCCTATGT GGTGTCGGGC
GTCGGCTTTC TGGGGGCCGG CACCATCATG AAGGAAGGGC TGAACGTGCG CGGGCTGAAC
ACCGCCGCCA CGCTCTGGGG CTCCGCCGCT GTGGGTGCGG CGACCGGCTC CGATCTCATT
GGGCAGGCCA TTCTCATTAC GCTGTTCGTG CTGGCCTCGA ACATCCTGCT GCGGCCGGTG
GTGGATCGCA TCAACCGCAC GCCGCTGGAC AACCAGGCGA GCGAAGTCAC GTACACCATG
TGCGTCATCT CGACCAGCGA ACGCCAGAAG GAGGCACTTG CCGATCTGGA ACGCCTGCTC
GAAGAAGCGA GCTACCCGAT CAGCGATCTG TCGGTCGAAC CCTTTGGCGA CGACCACGTG
GAAATTGAAG CCATGCTGAT GTCGACCGCC GTGAACGCAT CCGAGCTGGA CCGCATCGTG
GCGTCGCTGC AATCGCAGCC GCACGTGGCG CAGGCGTTCT GGAATCCGAG TACGACCGAA
TAA
 
Protein sequence
MTLQALAHLN IATLVDSFLS LASAFALGSL IGFERQVRQR TAGLRTNALV AVAASAFVDM 
AAQIGTASDT TRVIAYVVSG VGFLGAGTIM KEGLNVRGLN TAATLWGSAA VGAATGSDLI
GQAILITLFV LASNILLRPV VDRINRTPLD NQASEVTYTM CVISTSERQK EALADLERLL
EEASYPISDL SVEPFGDDHV EIEAMLMSTA VNASELDRIV ASLQSQPHVA QAFWNPSTTE