Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1343 |
Symbol | tsf |
ID | 8018988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1424082 |
End bp | 1424972 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830123 |
Product | elongation factor Ts |
Protein accession | YP_002981304 |
Protein GI | 241662944 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.222707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.284901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAA TTACCGCAAG CATGGTTGCA GAACTGCGCG CGAAGACCGA CGCGCCGATG ATGGAGTGCA AGAAGGCCCT GACCGAAGCC GAAGGCAACC TGGAAAAGGC CGAAGAGATC CTGCGCGTGA AGCTGGGCAA CAAGGCCGGC AAGGCCGCCT CGCGCATCAC CGCTGAAGGC GTGGTGGCCG CAGCCGTGGA AGGCACGACC GGCGCGCTGG TCGAGATCAA CTGCGAAACC GACTTCGTCT CGAAGAACGA TTCGTTCCTG GCCTTCGCCA ACTCGGTCGC AGCACTGATC GCCAAGAACA ACCCGGCTGA CGTCGCGGCT GTCGGCGCCC TGCCGCTGTC GCAAGACGGC TTCGGCCCGA CGGTGGAAGA CGTACGCGTG GGCCTGATCG GCAAGATCGG CGAGAACATG ACGATCCGTC GCTTCCAGCG TTTCGAAGGC ACTCAGCTGA CTTCGTACCT GCACGGCACC CGCATCGGCG TGATGGTGGC ATTCGGAGGC AACGAAGTGG CGGCCAAGGA CGCAGCAATG CAGGCTGCCG CGATGAAGCC CGTGTCGCTG TCGGCTGACG ACGTGCCTGC CGAGCTGGTC GCCAAGGAGC GCAGCGTTGC CGAGCAGAAG GCTGCGGAAT CGGGCAAGCC GGCTGAAATC GTTGCCAAGA TGGTCGAAGG CAGCGTGCAG AAGTACCTGA AGGAAGTCTC GCTGCTGAAC CAGCCGTTTG TGAAGAACGA TAAGCAGACC GTTGAGCAAA TGCTCAAGGC CGCCAACACG ACCGTGAAGG CTTTCACGCT CTACGTGGTG GGCGAGGGCA TCGAGAAGAA GCAAGACGAC TTTGCCGCTG AAGTGGCCGC CCAAGTGGCC GCCGCCAAGC AACAGGCGTA A
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Protein sequence | MAAITASMVA ELRAKTDAPM MECKKALTEA EGNLEKAEEI LRVKLGNKAG KAASRITAEG VVAAAVEGTT GALVEINCET DFVSKNDSFL AFANSVAALI AKNNPADVAA VGALPLSQDG FGPTVEDVRV GLIGKIGENM TIRRFQRFEG TQLTSYLHGT RIGVMVAFGG NEVAAKDAAM QAAAMKPVSL SADDVPAELV AKERSVAEQK AAESGKPAEI VAKMVEGSVQ KYLKEVSLLN QPFVKNDKQT VEQMLKAANT TVKAFTLYVV GEGIEKKQDD FAAEVAAQVA AAKQQA
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