Gene Rpic12D_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1343 
Symboltsf 
ID8018988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1424082 
End bp1424972 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID644830123 
Productelongation factor Ts 
Protein accessionYP_002981304 
Protein GI241662944 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.222707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.284901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA TTACCGCAAG CATGGTTGCA GAACTGCGCG CGAAGACCGA CGCGCCGATG 
ATGGAGTGCA AGAAGGCCCT GACCGAAGCC GAAGGCAACC TGGAAAAGGC CGAAGAGATC
CTGCGCGTGA AGCTGGGCAA CAAGGCCGGC AAGGCCGCCT CGCGCATCAC CGCTGAAGGC
GTGGTGGCCG CAGCCGTGGA AGGCACGACC GGCGCGCTGG TCGAGATCAA CTGCGAAACC
GACTTCGTCT CGAAGAACGA TTCGTTCCTG GCCTTCGCCA ACTCGGTCGC AGCACTGATC
GCCAAGAACA ACCCGGCTGA CGTCGCGGCT GTCGGCGCCC TGCCGCTGTC GCAAGACGGC
TTCGGCCCGA CGGTGGAAGA CGTACGCGTG GGCCTGATCG GCAAGATCGG CGAGAACATG
ACGATCCGTC GCTTCCAGCG TTTCGAAGGC ACTCAGCTGA CTTCGTACCT GCACGGCACC
CGCATCGGCG TGATGGTGGC ATTCGGAGGC AACGAAGTGG CGGCCAAGGA CGCAGCAATG
CAGGCTGCCG CGATGAAGCC CGTGTCGCTG TCGGCTGACG ACGTGCCTGC CGAGCTGGTC
GCCAAGGAGC GCAGCGTTGC CGAGCAGAAG GCTGCGGAAT CGGGCAAGCC GGCTGAAATC
GTTGCCAAGA TGGTCGAAGG CAGCGTGCAG AAGTACCTGA AGGAAGTCTC GCTGCTGAAC
CAGCCGTTTG TGAAGAACGA TAAGCAGACC GTTGAGCAAA TGCTCAAGGC CGCCAACACG
ACCGTGAAGG CTTTCACGCT CTACGTGGTG GGCGAGGGCA TCGAGAAGAA GCAAGACGAC
TTTGCCGCTG AAGTGGCCGC CCAAGTGGCC GCCGCCAAGC AACAGGCGTA A
 
Protein sequence
MAAITASMVA ELRAKTDAPM MECKKALTEA EGNLEKAEEI LRVKLGNKAG KAASRITAEG 
VVAAAVEGTT GALVEINCET DFVSKNDSFL AFANSVAALI AKNNPADVAA VGALPLSQDG
FGPTVEDVRV GLIGKIGENM TIRRFQRFEG TQLTSYLHGT RIGVMVAFGG NEVAAKDAAM
QAAAMKPVSL SADDVPAELV AKERSVAEQK AAESGKPAEI VAKMVEGSVQ KYLKEVSLLN
QPFVKNDKQT VEQMLKAANT TVKAFTLYVV GEGIEKKQDD FAAEVAAQVA AAKQQA