| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1013 |
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| Symbol | |
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| ID | 8018648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1065821 |
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| End bp | 1068232 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829794 |
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| Product | glycoside hydrolase family 31 |
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| Protein accession | YP_002980984 |
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| Protein GI | 241662624 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.36394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGT TGAATCCCCC CCGATTCGAA GTCCAGGCGC AGGAAGGCAA CCGGCTGCGG
CTGGCCAGCA GCGCCGGCGC TGCGATTGAA CTCTTCGTGC TGGAAGAAGA CATCATCCGC
GTGCTCGTGC TGCCGCAGGG CGACCTGCGC GGCCCGGCCA CGTGGTCGAT CGCCCCCGGC
GGTGACGACA CGCCGCTCGA AGGGCGTGAC CGCCGCGACC TGAGCGGCTT CGCGCTGCCC
GCATTTGCGC TGCACAGCGA CGCCGACACG CTGCGCGTGG AAACCAGCAA GATTCGCCTG
AGCGTCGCCC TGGCAGGCGG CTTCTGCACA TGGCAGATCC GCGGTGCCGG CGGTTGGCAG
ACCGTACTGA ACGATCGCCC AACGCAGGCC TACAACTTCG GCTATTGGGA CGAGCAGGTC
TACCACTACG TGCGCCGCGA ACCCGGCGAG ATGTACTTCG GCCTCGGCGA GCGCGCCGGC
GACATGAATC GTGCGCACCA GCGCTACGAG ATGCGCAACA TCGATGCGAT GGGCTACAGC
GCGCGCACGA CCGATCCGCT GTACAAGCAC ATCCCGTTCT ACGTGACGTG GCAGCCGGAA
AACCGCACCG GCTTCGGGCT GTTCTACGAC ACGCTGTCCG ATTGCAGCTT CGACATGGGC
CGCGAGCTGG ACAACTACCA CGGCCTCTAT CGCTACTTTG TCGCGCCGCA TGGTGATCTC
GACTACTACT TCATTGCCTC GCCCGATACG CCGCTCGACG CCACGCGCCG CTTCACGTGG
ATGACCGGCC GCCCCGCGTG GATGCCGAAG TGGGGCCTCG GTTATTCCGG CTCGACCATG
ACGTACACCG ACGCGCCCAA CGCGCAGGAA CAGATGGCCG AGTTCATCAA GGGATGCCGT
GAGCACGACA TCCTCTGCGA CTCGTTCCAT CTGTCGTCGG GCTATACGTC GATCGGGCCG
AAGCGCTACG TCTTCAACTG GAACACCGAC AAGTTCCCGG ATGCACGCGG CTTCGTCCAG
AGCTATCTGG ACGCGGGCAT TCGCCTGTGC CCGAACATCA AGCCGTGCCT GCTGCGCGAT
CACCCGAAGT TTGAAGAAGC GAGAGAAGCC GGCTTGCTGA TTTGTGCCGC AAACGGCGAG
CCGGCCTGGG TGCAATTCTG GGATGAGGTT GGCGCGTATC TCGACTTCAC CAACCCGAAA
ACGCTCGACT GGTGGAAGGC CAACGTCAAG AGCGCGCTGC TCGAGTACGG CATGGCGTCC
ACCTGGAACG ACAACAACGA GTTCGAAGTC TGGACGCCCG ACGCTTTCGC TCACGGGTTC
GGCAAGAAAG CGCGTATCCG CGAAGCCAAG GTGCTGCACA CCATGCTGAT GATGCGCGCC
TCGCGCGAAG CGCAGCTCGA ATTTGCACCG CAGCGTCGGC CGTTCCTGGT GTCGCGCTCG
GGCGGTGTCG GCATGCAGCG CTATGTGCAG ACCTGGTCCG GCGACAACTA CACCTCGTGG
GAAACGCTGC GTTACAACCT GAAGATGGGT CTGGGGCTGG CGCTGTCGGG CGTCTCGAAC
ATCGGCCACG ACATCGGCGG GTTTGCGGGC CCCGCGCCAT CGCCCGAGTT GCTGGTGCGC
TGGGTGGCGT TTGGCGTGTT CATGCCGCGC TTCTCGATCC ATTCGTGGAA TGACGACAAG
ACCGTCAACG AGCCGTGGAT GTATCCGCAG GTCACCTCGC AGATTGCCTC GCTGATCAAG
CTCCGCTATC GGCTGATTCC GTATCTGTAC GAACTGCTGT GGCAATCCAC GCAGGCCTAC
GAGCCGGTGC TGCGCCCGAC GTTTGCCGAG TTCCCGAACG ACCGCCGCTG CTACGCCGAG
TGCGATGACA TGATGCTCGG CGCGTCGCTG CTCGTGGCGC CGACGGTGGA CGAAGGGCAG
ACCCTTCGCA CTGTCTACCT GCCGGCCGGC GCACGCTGGG TGTCGTACTG GAGCGGCGAG
CCGTTCGAGG GCGGACAGAC CATCACGCTG CCTTCGCCGT GGGACCAACC CGTCATGCTG
ATTCGCGAAG GCGGCGTGAT CGCGCTGAAC GTGGCGGAGC AGCATTTCGA CCGGCGCGCC
GATCAACGCG GCTTCCTCGT CGTGCCCATG CAAGGCGTTG GCGAATCCGC TGGCGGCTGC
GTTGAAGACG ACGGCGAAAC CGAAGCGTGG CGCCGCGGCG AGCAGGGCCG CTGGAGCGTG
CGCGCAGTGT CGGATGCGCA GGCGATCACG CTGCACGTAT CGCGCGAAGG CAAGATGCCG
ACGTCGGCCG ACACGGTGGA GATTCACTTG CCCGCCGGCG ATGCGCGGCC AGTACAGACG
CCGCATGCCC GCGTGCTGGA AACCGTTGTT GCCGGTGGCT GGCGCCGCCT GACGTTGCTA
TTGCCGGCCT AG
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| Protein sequence | MSMLNPPRFE VQAQEGNRLR LASSAGAAIE LFVLEEDIIR VLVLPQGDLR GPATWSIAPG
GDDTPLEGRD RRDLSGFALP AFALHSDADT LRVETSKIRL SVALAGGFCT WQIRGAGGWQ
TVLNDRPTQA YNFGYWDEQV YHYVRREPGE MYFGLGERAG DMNRAHQRYE MRNIDAMGYS
ARTTDPLYKH IPFYVTWQPE NRTGFGLFYD TLSDCSFDMG RELDNYHGLY RYFVAPHGDL
DYYFIASPDT PLDATRRFTW MTGRPAWMPK WGLGYSGSTM TYTDAPNAQE QMAEFIKGCR
EHDILCDSFH LSSGYTSIGP KRYVFNWNTD KFPDARGFVQ SYLDAGIRLC PNIKPCLLRD
HPKFEEAREA GLLICAANGE PAWVQFWDEV GAYLDFTNPK TLDWWKANVK SALLEYGMAS
TWNDNNEFEV WTPDAFAHGF GKKARIREAK VLHTMLMMRA SREAQLEFAP QRRPFLVSRS
GGVGMQRYVQ TWSGDNYTSW ETLRYNLKMG LGLALSGVSN IGHDIGGFAG PAPSPELLVR
WVAFGVFMPR FSIHSWNDDK TVNEPWMYPQ VTSQIASLIK LRYRLIPYLY ELLWQSTQAY
EPVLRPTFAE FPNDRRCYAE CDDMMLGASL LVAPTVDEGQ TLRTVYLPAG ARWVSYWSGE
PFEGGQTITL PSPWDQPVML IREGGVIALN VAEQHFDRRA DQRGFLVVPM QGVGESAGGC
VEDDGETEAW RRGEQGRWSV RAVSDAQAIT LHVSREGKMP TSADTVEIHL PAGDARPVQT
PHARVLETVV AGGWRRLTLL LPA
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