Gene Rpic12D_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1010 
Symbol 
ID8018645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1062211 
End bp1062966 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID644829791 
ProductGntR domain protein 
Protein accessionYP_002980981 
Protein GI241662621 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCG TCAGCTCGCC CGCAACGCTC GTGCGCCGCA CCCAAAGCTT GGCGGACGTG 
GTGGTGGACC ACGTCAAAGG GCGCATTGCC AGTGAATCTC TGCGGATTGG GGACAAGCTC
CCCACGGAAT CCGCGTTGAT GGAAGCGCTG GGCGTGAGCC GCACGGTGGT ACGCGAGGCG
ATTTCGCGCT TGCAAGCCAA GGGGCTGATC GAAACGCGTC ACGGCATCGG CAGCTTTGTG
CTGCCGCCAC GCATCGACAA CAGCATCCCG CTGGGCGATG CGTCGACGAT GCACGAGATC
TTGAGCATGC TGGAACTGCG CGTCGCCATT GAGACGGAAT GCGCAGGCTT GGCCGCACAG
CGCATCTCCG CGGCCGAGAT CGAGGCGCTG CGTCTGGCGC TCGAAGCCAT CGAGCAGGAC
CAGGCGGAGG GCAACGACAG CGCCACCTCC GACCTCCAAT TTCATCTGAG CATTGCCCGC
GCCACCGGGA ACGAACATTT CGTGGGCGCC CTCGCCCAGC TCGGCAAGAC GCTCATTCCC
CGCACGCGGA TGGGGCTGGC GCAGGTCGGC TATCTGAACG CGCCCGAACT GCGCGCCACG
GTCAACCGCG AGCACCACAG CGTTTTCGAA GCCATTGCGC GGAAAGATCC CGAAGCCGCT
CGCGCCGCCA TGCGCATGCA CCTGTCAAAC AGCCGCGAGC GTCTGCGCCG GGCGCACGAA
GCGGCTGGCA GTCAAAAGAC CGCAACAGGC AGCTGA
 
Protein sequence
MPTVSSPATL VRRTQSLADV VVDHVKGRIA SESLRIGDKL PTESALMEAL GVSRTVVREA 
ISRLQAKGLI ETRHGIGSFV LPPRIDNSIP LGDASTMHEI LSMLELRVAI ETECAGLAAQ
RISAAEIEAL RLALEAIEQD QAEGNDSATS DLQFHLSIAR ATGNEHFVGA LAQLGKTLIP
RTRMGLAQVG YLNAPELRAT VNREHHSVFE AIARKDPEAA RAAMRMHLSN SRERLRRAHE
AAGSQKTATG S