Gene Rpic12D_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0931 
Symbol 
ID8018563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp979087 
End bp979485 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content62% 
IMG OID644829710 
Productputative periplasmic cytochrome type-c oxidoreductase signal peptide protein 
Protein accessionYP_002980903 
Protein GI241662543 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.678097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.520511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCTCGCTCGC AATCTCGTTC AATCTGGGCG CGCTGATGCT GGCAGCCGCT 
GTGTCGGCGC AGGCTGCCGA TATTGAAAAG GGCAAGCAAC TGGTGGAGAA GGGCGCTTGC
GTGGCCTGCC ATGGCGCCGG CCTGAACGCT CCGATCTCGC CGGACTATCC GAAGCTCGCA
GGCCAGCACG GCGATTACAT CTATCACGCG CTGCTGGCCT ATCAGACCAG CAACAACCCG
CTGGTGGGCC GCAGCAACGC CATCATGGCG GGCCAGGTCA ACAGCAACCC CGCCACCATC
GGTGCCGACG GCAAGCCGCG TCCCTTTACG CAGGCTGAGC TGAAGGACAT TGCTGCGTAC
ATCGAATCGC TGCCGGGCTC GCTGGTGCTC AAGAAGTAA
 
Protein sequence
MKKISLAISF NLGALMLAAA VSAQAADIEK GKQLVEKGAC VACHGAGLNA PISPDYPKLA 
GQHGDYIYHA LLAYQTSNNP LVGRSNAIMA GQVNSNPATI GADGKPRPFT QAELKDIAAY
IESLPGSLVL KK