Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0869 |
Symbol | |
ID | 8018500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 911015 |
End bp | 912634 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829648 |
Product | Alkaline phosphatase |
Protein accession | YP_002980842 |
Protein GI | 241662482 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.717187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.577908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC AGCCGATCTT CAAGCCGACC CGCCGCACGC TGATCAAGGG TCTTGTTTCC GCCAGCGGTT CCGCGCTGCT GGGCTCGCGT ATGGGCGAAG TGTTGGCCCA GGGCGTTGCA CCGGCCGTGG TGACGTCCGA GCGCCTGCGT CCGCAAGTGC CCGGCGGAGT GATGAGCGGT GATATCACGG CTGACAGTGC CATCGTCTGG AGCCGCACCG ATCGTCCGGC ACGCATGATC GTCGAATACT CGACGGACGC CGCCTTCAAG AACGTTGCGC GTCGCGTTGG CCCAGCCGCA CTTGAAAGCA ACGGCCTGAC AGCCCGCGTC GATCTGACCG GTCTGCCTGC CGGCGCAGAC CTGTTCTACC GCGTGCGCTT CCAGGACCTC GTGCACGATA AGGTCTTCAG CGAGCCGGTT GCCGGTCGCT TCCGCACGGC GCCCGTCCAG GCCAATCGCC CCATCTGCTT CGTTTTCTCC GGCGACGAGG CCGGCCAGGG GTGGGGCATC AACGAGCGTT TCGGCGGCTA TCGTCTGTAC GAAGCGATGC GCCGCGAATC GCCCGACTTC TTCATCCACT CCGGCGATCA GATCTATGCC GACGGCCCGA TCCAGGCCGA AGTGCAACTG CCCGACGGCT CGCTGTGGAC CAACTTCGTT ACCGAGGCGA AGTCGCACGT TGCACAGACG CTCGACGACT ATCGCGGCGC CTTTGCCTAC AACCAGCTCG ACAAGAACAA GCGCGCGTTT TCCGCCGAGG TGCCGTTCCT CGTGCAGTGG GACGACCACG AGGTGCGCAA CAACTGGTAC CCCGGCCAGC AGATCGGCCC GGAAGAGAAG CGCTATCAGG AGCGCAGCGC ATCCGTGCTG GCCGCCCGCG CAAAGCAGGC GATGTTCGAG TACAACCCGT TCCGTTTCAA CCCCGTCGAC CCCGAGCAGA TCTACCGCGC ATTCCGGTAC GGCCCGCTGC TCGACGTGTT CATGCTGGAC GAGCGCAGTT ATCGCGGTCG CAACTCGCCG AACCGGCAGA CCACGCTGGA TGCGGATTCC GCTTTCCTCG GCCCGGCGCA GACGGCGTGG CTGAAGCAAA CGCTCAAGCA GTCAAAGGCC ACGTGGAAGG TGATTGCCAG CGACATGCCG ATCTCGCTGG TGGTGCCTGA TCTGAACCCG GACGTGCCAA AGGGTACCTA CGAAGCCTGG TCCAATGCGG ATGATGGCGC GCCGTCGGGC CGCGAATTGG AATTGGCCGA AATCCTGCGT TTCATCAAGC AGGAGAACAT CCAGAACGTG GTGTGGGTGA CGGCAGACGT GCACTACGCG CAAGCGACGT ACTACCACCC GTCGCGCGCC AAATTCACGG AGTTCAAACC GTTCTGGGAG TTCGTCGGCG GCCCGATCAA CGCGGGCACG TTCGGGCCTA ACGAAGTGGA TCAGACCTTT GGGCCGGACC TGCGCTACAT CAGCATTCCC AAGGACAATC CGCAGAACCA GTCGCCGGCA GCGCTGCAGC AGTATTACGG CCGAGCCAAG ATCGACCCGG CCACGCGCAC GATGCTTGTA TCGCTGCACG ATCTCGACGG CAAATCGCTC TGGGAAGTGA AGCTCGACCC CGAGGCGTAG
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Protein sequence | MSDQPIFKPT RRTLIKGLVS ASGSALLGSR MGEVLAQGVA PAVVTSERLR PQVPGGVMSG DITADSAIVW SRTDRPARMI VEYSTDAAFK NVARRVGPAA LESNGLTARV DLTGLPAGAD LFYRVRFQDL VHDKVFSEPV AGRFRTAPVQ ANRPICFVFS GDEAGQGWGI NERFGGYRLY EAMRRESPDF FIHSGDQIYA DGPIQAEVQL PDGSLWTNFV TEAKSHVAQT LDDYRGAFAY NQLDKNKRAF SAEVPFLVQW DDHEVRNNWY PGQQIGPEEK RYQERSASVL AARAKQAMFE YNPFRFNPVD PEQIYRAFRY GPLLDVFMLD ERSYRGRNSP NRQTTLDADS AFLGPAQTAW LKQTLKQSKA TWKVIASDMP ISLVVPDLNP DVPKGTYEAW SNADDGAPSG RELELAEILR FIKQENIQNV VWVTADVHYA QATYYHPSRA KFTEFKPFWE FVGGPINAGT FGPNEVDQTF GPDLRYISIP KDNPQNQSPA ALQQYYGRAK IDPATRTMLV SLHDLDGKSL WEVKLDPEA
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