| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0846 |
|---|
| Symbol | |
|---|
| ID | 8018477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 886992 |
|---|
| End bp | 888116 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644829625 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_002980819 |
|---|
| Protein GI | 241662459 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0562865 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTGC AGTTCGGCCC CGAGTATGTC CGCGCCATCG CCCCTTATGT GGCCGGCAAG
CCGATTTCCG AAGTGGCACG TGAGTTCGGC CTGGATGCCG CGCGCATCGT CAAGCTGGCG
TCCAACGAAA ATCCGCTGGG CATGCCACAG TCAGCCAAGA ACGCGATGGC TGCGGCCATT
GACGAACTGG CGCGCTATCC GGATGCCAAC GGTTTCAGCC TGAAAGCAGC GCTGCATGCC
AAGTTTGGCG TGCCGGAAAC ATGGATCACG CTCGGCAACG GCAGCAATGA CATCCTCGAA
CTGGCGGCTC GCGCGCTGGT GTCGCCGGGG CAGGCCGTGA TTTACGCGCA GCATTCGTTT
GCCGTGTATG CGCTGGCGGC CCAGGAAGTG GGCGCGCGCG CCATCGAGGT GCCGGCCCGC
GATTACGGCC ATGACCTCGA CGCGATGGCC GCTGCCATCA CGCCGGACAC CCGCCTGATC
TACATCGCCA ACCCGAACAA CCCGACCGGC ACGTTCCTGC CGGCCGATGC GATTGCGGCG
TTCCTGGCGA AGGTGCCGCC GACGGTGGTC GTCGTGCTGG ACGAGGCGTA CAACGAATTC
CTGGAGCCGG AGCAGCAGTA CGACTCCACC GCGTGGGTGC GCCAATACCC GAACTTGCTG
GTGTCGCGCA CGTTCTCCAA GGCGTATGGG CTGGCCGGCT TGCGTGTGGG CTACGGCATT
GCGCAACCTC AATTGACCGA TCTGCTCAAT CGCATCCGCC AGCCGTTCAA CGTCAACAGC
CTGGCGCAAG CAGCGGCAGT AGCGGCGCTC AACGACGCAG AATTCCTGCG CCAATCGGCC
GAACTGAACG CTGCCGGATA CGTGCAACTG ACGGACGCCT TTGATCGGCT GGGTCTGCAG
TACGTACCGT CCGCGGGCAA TTTTGTGCTG GTTCGCGTGG GTGATGACAC GAGCGCCGGT
GCGCGCGTGA ACGTTGCATT GCTCAAGCAA GGTGTGATCG TGCGTCCTGT CGGCAACTAC
GGCTTGCCGC AATGGCTGCG CATCAGCATC GGCTTGTCGG AAGAGAACGC CACATTCATC
GCCGCCCTGG AGGCAGCGCT GGCGCAGGAA AAAGCGGCCG CGTAA
|
|---|
| Protein sequence | MSLQFGPEYV RAIAPYVAGK PISEVAREFG LDAARIVKLA SNENPLGMPQ SAKNAMAAAI
DELARYPDAN GFSLKAALHA KFGVPETWIT LGNGSNDILE LAARALVSPG QAVIYAQHSF
AVYALAAQEV GARAIEVPAR DYGHDLDAMA AAITPDTRLI YIANPNNPTG TFLPADAIAA
FLAKVPPTVV VVLDEAYNEF LEPEQQYDST AWVRQYPNLL VSRTFSKAYG LAGLRVGYGI
AQPQLTDLLN RIRQPFNVNS LAQAAAVAAL NDAEFLRQSA ELNAAGYVQL TDAFDRLGLQ
YVPSAGNFVL VRVGDDTSAG ARVNVALLKQ GVIVRPVGNY GLPQWLRISI GLSEENATFI
AALEAALAQE KAAA
|
|---|
| |