Gene Rpic12D_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0623 
Symbol 
ID8018249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp657429 
End bp657887 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content59% 
IMG OID644829402 
Productheat shock protein Hsp20 
Protein accessionYP_002980600 
Protein GI241662240 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.844177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.400233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAT TGACTCCGTG GGACCCCTTC CGGGAACTGG ATGAATTGCA AAACCGCCTG 
GCGACGATGT TGGGACGGAC ACCCCAGCGA GAGGGCGCCC GTACCGGCAA CGAAGCCATG
ACCACGGCGG ACTGGGCACC AATGGTGGAC ATCAGCGAGG ATGAGAACGC ATTCCTCCTC
AAGCTGGATC TGCCGGAGGT CCCCAAGGAT GCCGTGCGCG TCAGCGCGGA AAACGGCGTG
CTCACCATCA GCGGCGAGCG CAAACTGGAA AAAGAGGAGC AGGGCAAGAA GTTCCACCGC
ATCGAACGTG CGTATGGCCG CTTTGTGCGC AGCTTTGTCT TGCCTGACAA CGTTGATCCG
ACCAAGGTGA CGGCTTCGAT GAAAGACGGC GCGCTGGAAG TGCGGCTTGT CAAGGCCGAG
CAAGCCAAAC CGAAACAGAT TGAAATCTCA GTCAACTAA
 
Protein sequence
MSALTPWDPF RELDELQNRL ATMLGRTPQR EGARTGNEAM TTADWAPMVD ISEDENAFLL 
KLDLPEVPKD AVRVSAENGV LTISGERKLE KEEQGKKFHR IERAYGRFVR SFVLPDNVDP
TKVTASMKDG ALEVRLVKAE QAKPKQIEIS VN