Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0615 |
Symbol | |
ID | 8018241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 649983 |
End bp | 650948 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644829394 |
Product | peptidase M48 Ste24p |
Protein accession | YP_002980592 |
Protein GI | 241662232 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.456221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTC ATCATCCCAG TGATCCGCGC ACGGCGCTGT TGCAACACCG CTGGCTCAAC CGCCTGCAGA CCGGGCTGTT GGTCCTGACC CTGGTCGGGA TCGCAGCCGC AGCAGGGAGA CTGCCGTTTG GGGAAGGCGG CCTGTGGCTC GCGCTGTTTG CCGTTGCAGG TGCGTTGCTG CTGGAACCGG TAGCCGCGTC GGCGCTGAGC TTGCGCCTGT ACCGCGTACG GGCCTTGCAC CCGCAAGAAG CCCACGAGAT GTGGGCCCTG TTGCGCGAGC TGCCCGCCCG TGCCGGTTTG CCCGCCACGC CGGTGCCGCA CTATGTGCCC AGTGCCGTCG TCAACGCCTT CGCCACCGGA TCGAAGCAGG AGGCATCGAT CGCCCTCACC GATGGCCTGC TGCGCAGCCT GAGCCCACGC GAGCTGGCGG GTGTGCTCGC GCACGAGATC GCGCACATCA CCAATGAGGA TCTGCGCGTC ATGAGGCTGG CGGATTCCGT CAGTCGCCTC ACGAGCCTGC TGGCCCTCAT GGGACAAATC GCGATCCTGC TCAACCTGCC CGCGCTGCTG GTTGGCGCGG CGGAGGTCTA TTGGCCTGGT CTATTGTTAT TGGCCGCATC GCCCCAGCTG GCCCTGCTCG CACAGCTCGG CTTGTCTCGC GTGCGTGAGT TCGACGCTGA CCGCCTCGCG GCGGAACTGA CGGGCGACCC GCAGGGGCTG GCGTCCGCGC TGGCGAAAAT CGAGCGGGTC AGCCGCTCCT GGCGTGCCTG GCTGTGGCCG GGATGGGGCA ATCCCGAGCC CTCCTGCTTG CGCACGCATC CGGCAACGCA AGAGCGTATC GCACGCCTGC TGACGTTGGC GCCTGGGCCA GCATCAGCGT TGCCATTCCA CGCGCCCCAT TTCTTGCCGG AATCCGCTGT GACGCCGCGC CCGCCGCGCT GGCACCCGAG CGGGCTGTGG CGCTGA
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Protein sequence | MTRHHPSDPR TALLQHRWLN RLQTGLLVLT LVGIAAAAGR LPFGEGGLWL ALFAVAGALL LEPVAASALS LRLYRVRALH PQEAHEMWAL LRELPARAGL PATPVPHYVP SAVVNAFATG SKQEASIALT DGLLRSLSPR ELAGVLAHEI AHITNEDLRV MRLADSVSRL TSLLALMGQI AILLNLPALL VGAAEVYWPG LLLLAASPQL ALLAQLGLSR VREFDADRLA AELTGDPQGL ASALAKIERV SRSWRAWLWP GWGNPEPSCL RTHPATQERI ARLLTLAPGP ASALPFHAPH FLPESAVTPR PPRWHPSGLW R
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