Gene Rpic12D_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0615 
Symbol 
ID8018241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp649983 
End bp650948 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID644829394 
Productpeptidase M48 Ste24p 
Protein accessionYP_002980592 
Protein GI241662232 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.456221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTC ATCATCCCAG TGATCCGCGC ACGGCGCTGT TGCAACACCG CTGGCTCAAC 
CGCCTGCAGA CCGGGCTGTT GGTCCTGACC CTGGTCGGGA TCGCAGCCGC AGCAGGGAGA
CTGCCGTTTG GGGAAGGCGG CCTGTGGCTC GCGCTGTTTG CCGTTGCAGG TGCGTTGCTG
CTGGAACCGG TAGCCGCGTC GGCGCTGAGC TTGCGCCTGT ACCGCGTACG GGCCTTGCAC
CCGCAAGAAG CCCACGAGAT GTGGGCCCTG TTGCGCGAGC TGCCCGCCCG TGCCGGTTTG
CCCGCCACGC CGGTGCCGCA CTATGTGCCC AGTGCCGTCG TCAACGCCTT CGCCACCGGA
TCGAAGCAGG AGGCATCGAT CGCCCTCACC GATGGCCTGC TGCGCAGCCT GAGCCCACGC
GAGCTGGCGG GTGTGCTCGC GCACGAGATC GCGCACATCA CCAATGAGGA TCTGCGCGTC
ATGAGGCTGG CGGATTCCGT CAGTCGCCTC ACGAGCCTGC TGGCCCTCAT GGGACAAATC
GCGATCCTGC TCAACCTGCC CGCGCTGCTG GTTGGCGCGG CGGAGGTCTA TTGGCCTGGT
CTATTGTTAT TGGCCGCATC GCCCCAGCTG GCCCTGCTCG CACAGCTCGG CTTGTCTCGC
GTGCGTGAGT TCGACGCTGA CCGCCTCGCG GCGGAACTGA CGGGCGACCC GCAGGGGCTG
GCGTCCGCGC TGGCGAAAAT CGAGCGGGTC AGCCGCTCCT GGCGTGCCTG GCTGTGGCCG
GGATGGGGCA ATCCCGAGCC CTCCTGCTTG CGCACGCATC CGGCAACGCA AGAGCGTATC
GCACGCCTGC TGACGTTGGC GCCTGGGCCA GCATCAGCGT TGCCATTCCA CGCGCCCCAT
TTCTTGCCGG AATCCGCTGT GACGCCGCGC CCGCCGCGCT GGCACCCGAG CGGGCTGTGG
CGCTGA
 
Protein sequence
MTRHHPSDPR TALLQHRWLN RLQTGLLVLT LVGIAAAAGR LPFGEGGLWL ALFAVAGALL 
LEPVAASALS LRLYRVRALH PQEAHEMWAL LRELPARAGL PATPVPHYVP SAVVNAFATG
SKQEASIALT DGLLRSLSPR ELAGVLAHEI AHITNEDLRV MRLADSVSRL TSLLALMGQI
AILLNLPALL VGAAEVYWPG LLLLAASPQL ALLAQLGLSR VREFDADRLA AELTGDPQGL
ASALAKIERV SRSWRAWLWP GWGNPEPSCL RTHPATQERI ARLLTLAPGP ASALPFHAPH
FLPESAVTPR PPRWHPSGLW R