Gene Rpic12D_0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0614 
Symbol 
ID8018240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp648807 
End bp649958 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content65% 
IMG OID644829393 
Product2-alkenal reductase 
Protein accessionYP_002980591 
Protein GI241662231 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.46298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACC CCGACCCGTA CCCACGCCCC GCACCGGACC CCTTCATCCG GCGCTGGCTC 
TTCATCACCG CCTGTATTGC CACGCTCATG CTGCTGTGGC AGTTCCTGCC CGCCATCGAG
GCCTGGTTCA GTCCGCGCGA GGCGGCAGAT CGCACCGTGA CGGCGCGTGG CGATCTGGCG
GCGGACGAGA AAGCCACCAT CGAACTGTTC GAAGAATCGC GCGCTTCGGT GGTCTACATC
ACCACCGCGC AGCTGGTGCG CGACGTCTGG ACTCGCAATG TCTTTTCCAT GCCGCGCGGC
ACCGGTTCGG GCTTTATCTG GGACGATGCC GGCCACGTCG TCACCAACTT CCACGTCATC
CAGGGTGCTT CTGAAGCCAC GGTCAAACTC GCCGATGGCC GCGACTACCA GGCCGCGCTG
GTGGGGACGA GCCCAGCGCA CGACATCGCC GTGCTCAAGA TTGGCGTCGG TTTCAAGCGC
CCGCCGGCCG TGCCGGTCGG CACCAGTGCC GACCTCAAGG TGGGTCAGAA GGTGTTCGCT
ATCGGCAACC CCTTCGGCCT GGACTGGACG CTCACCACCG GCATCGTCTC CGCGCTCGAC
CGCTCGTTAC CCGGAGAAGC GGGCGGCCCG GCCATCGATC ACCTGATCCA GACCGACGCC
GCCATCAACC CTGGCAACTC CGGTGGGCCG CTGCTCGATT CGGCAGGAAG GCTCATCGGC
ATCAACACGG CGATCTATAG CCCCTCCGGC GCCTCGGCCG GGATTGGTTT CGCCGTGCCG
GTGGACACCG TCATGCGCGT AGTCCCGCAA CTCATCAAGA CCGGTAAGTA CATCCGTCCG
GCGCTGGGCA TTGAGGTGGA CGAACAGCTC AATCAGCGTC TGCTTGCACT GACCGGAAGC
AAGGGCGTGT TCGTGTTGCG TGTTACCCCT GGTTCGGCAG CGCACAAGGC CGGCCTCGCG
GGTGTCGAAG TCACGCCGCA AGGCATCGTG CCGGGCGACC GCATCATCGA TGTTGATGGC
AAGGCGACGG ACGATGTGGC CAAGCTGCTC GCGCGGCTAG ACGACAGGAA GGTCGGCGAT
GTGGTGGTCT TGTCAGTGGA ACGGGCCGGC AAATCGCGCG AGGTGCGTGT GGAGCTGCAA
CCCGGGAATT GA
 
Protein sequence
MAYPDPYPRP APDPFIRRWL FITACIATLM LLWQFLPAIE AWFSPREAAD RTVTARGDLA 
ADEKATIELF EESRASVVYI TTAQLVRDVW TRNVFSMPRG TGSGFIWDDA GHVVTNFHVI
QGASEATVKL ADGRDYQAAL VGTSPAHDIA VLKIGVGFKR PPAVPVGTSA DLKVGQKVFA
IGNPFGLDWT LTTGIVSALD RSLPGEAGGP AIDHLIQTDA AINPGNSGGP LLDSAGRLIG
INTAIYSPSG ASAGIGFAVP VDTVMRVVPQ LIKTGKYIRP ALGIEVDEQL NQRLLALTGS
KGVFVLRVTP GSAAHKAGLA GVEVTPQGIV PGDRIIDVDG KATDDVAKLL ARLDDRKVGD
VVVLSVERAG KSREVRVELQ PGN