Gene Rpic12D_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0551 
Symbol 
ID8018177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp583467 
End bp583643 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content63% 
IMG OID644829330 
ProductFlp/Fap pilin component 
Protein accessionYP_002980528 
Protein GI241662168 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.871798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA TGATCAAGCG TTTCGTGCGC GAAGAAGACG GTGCAGCCGG CGTGGAATAC 
GCACTGCTGC TGGCATTTGT GGCACTGGTG ATGGTGGCCT CTGGCCCCAC CGTCAAGGCT
GCCGTCGGCA GCATCTGGAG CACCATCGCG ACCCAGCTGT CGACGGCCGC CGCCTGA
 
Protein sequence
MKAMIKRFVR EEDGAAGVEY ALLLAFVALV MVASGPTVKA AVGSIWSTIA TQLSTAAA