| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0464 |
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| Symbol | |
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| ID | 8018090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 489060 |
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| End bp | 490832 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644829244 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_002980442 |
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| Protein GI | 241662082 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.325512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGAT CTTGTTTTCT GCTGTCGCCG CTCTGGGTTG TCATTGCCAT GTGCGGAATG
GTCCCTTTTG TGGTGGCACC GCATTCGTAT CCATTGCCCA CGTTCTATGC CGAGTTTGCA
GCGGGCATCT GCTGGATTGC TCTGGCGGTC GTTGTACTAG CGCTCACGTG GCGTAATAAG
GCGAGATTGC CTGCGATTGC CCTGGCTCCG TTTGCATTAG TCGGCGTCCT TTTTGCACAA
TTGCTGATCG CGCCGCCCCT TAATCCGTCT TATTCGCTTG AGGCAACCGT CTTTCTGCTG
GCGGCTGCAG CGGCTTGTGG CCTTGGTGCG CGATGCCGCA ACCTGCCTGG TGTGCTCGAG
GCGTTTGCCA TTGGCTTGGT ACTAGGTGGG CTGGCGACAG TGGCGGTCGA ATTGCTGCAG
TTGTTCCGCG TCCAGGGCTT GCCGATCGCC TTCTTTTCGA TACTCCCTGC AGGCACGGAC
CGACGCATGT GGGGCAACAT CAATCAACCG AACCTGCTTG CTTCGTATCT CGCTTTTGGA
ATAGCTGCCA GCGGATTTCT TGCGCATCGG TGCAGGCACG CGCGAATTCC ACTTGCACTG
ATCGCCGTGA TTTTTCTCTT GGGGATGTCC TTGGCATTCT CTCGCACCGC TTGGCTGCAC
ATCGTGGTCT TGGGAACACT TGCTGGTGCG ATATGGACGC TTGAGCAACG TGGTTGGCGG
AGATGGGTGA AGGCGTGCGT GCCGGCTCTA GTGTTGTTGG TGACCTACCA ACTCTGCAAC
TGGCTCGTGG CTTACGCCAA CATTCGTTGG CACTTGGATT TGCCGACCTC GATGGGCGAG
CGCATCAACG AGGGGGTTGG CCCACGTGCC GTCCTCTGGC AGCATGCGTG GCACATGTTT
GTCGTCCACC CGTGGCTCGG GGGCGGCTGG GGGGACTACG CGTGGAACCA GTATTTGCAG
ACTGATCAGC TCGGCCGCGC CGTGATGGCG ACGAACGCGC ACAACATCGT GCTGGACCAA
CTGGCGAAGC TCGGTGTGCT TGGCTTGCTG GCTGTAGCGT TGCCGTTTCT TGGCTTTGTT
TGGAACCTGC GCAAGCGCCG CGCGACGCCA GGGATGGCAT TCCTGCTTGG CACCATCCTT
GTGATGGGCG CGCATTCAAT GCTTGAGTTC CCCTTGCATT ACCTGTTCTT CCTGTTGCCG
TTTGCGTTTG CGTTGGGCTA TCTCGATGAA CGGAGCTTGC CCGCGCCGTC TAGCAGCATG
GCCTGGACAT TGACCGCGGT TCTTTCTGTG GGGGCTGCGG CATTGATGAG TCATCTCTGG
GGTGACTACA GAGCTGTGGA GCGCCTCAAC TACGCTCCGG ACGGCCCGGC AGCTGAATGG
GCTCGGTATC AGCAACATGG TTCGACATTG CTGTTGCCCT ATGAACAGCT TGTCATTTCG
ATCAACTTGC GGGTTGCTCC GGATATGGCG TCGTCGCTGT TGAAGATGGG GCTGCAGGCT
GCGCAGTTTT ATCCTGTTGG CTCTACGGTC CAGCGTTACG CGCTCGGGCT CGCTTACCAG
GGGAAGACAG ACGAGGCAGT CCTCCAGATT CGGCGTCTGC GTGACGAGTA CTGGTACGAG
ACCGACTATG TGCCTCAAAT CGGCCTGCTT ATCCAACTCT GCTCGCGGAA GAACGACACC
CTCGCCGCAT TTTGCACTCG CTTGAAATCC GAGAAACTAC TTGTCGAACC AGGCGCAGAG
ACGCAAACAA GACCGGTACA GATGTCGAAA TGA
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| Protein sequence | MLRSCFLLSP LWVVIAMCGM VPFVVAPHSY PLPTFYAEFA AGICWIALAV VVLALTWRNK
ARLPAIALAP FALVGVLFAQ LLIAPPLNPS YSLEATVFLL AAAAACGLGA RCRNLPGVLE
AFAIGLVLGG LATVAVELLQ LFRVQGLPIA FFSILPAGTD RRMWGNINQP NLLASYLAFG
IAASGFLAHR CRHARIPLAL IAVIFLLGMS LAFSRTAWLH IVVLGTLAGA IWTLEQRGWR
RWVKACVPAL VLLVTYQLCN WLVAYANIRW HLDLPTSMGE RINEGVGPRA VLWQHAWHMF
VVHPWLGGGW GDYAWNQYLQ TDQLGRAVMA TNAHNIVLDQ LAKLGVLGLL AVALPFLGFV
WNLRKRRATP GMAFLLGTIL VMGAHSMLEF PLHYLFFLLP FAFALGYLDE RSLPAPSSSM
AWTLTAVLSV GAAALMSHLW GDYRAVERLN YAPDGPAAEW ARYQQHGSTL LLPYEQLVIS
INLRVAPDMA SSLLKMGLQA AQFYPVGSTV QRYALGLAYQ GKTDEAVLQI RRLRDEYWYE
TDYVPQIGLL IQLCSRKNDT LAAFCTRLKS EKLLVEPGAE TQTRPVQMSK
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