Gene Rpic12D_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0403 
Symbol 
ID8018028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp420146 
End bp420472 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content64% 
IMG OID644829182 
Productbranched-chain amino acid transport 
Protein accessionYP_002980381 
Protein GI241662021 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.661242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TGATCCTCTT CGGCGTGCTG TTGATTGCCG GCGCCGCCAC CTATCTGATC 
CGCCTATCGT TCATCGCGCT GGAAGGGCGC ATGAACCTGC CGATGTGGTT CCGCAGCGCC
CTGCCCTACG TGCCGGCCGC GATGCTGACC GCGCTCATCG CGCCCGACCT GCTGATGCGC
GACGGCGCGC TCGCGGTGTC GATCGATAAC CCGCGCCTGC TTGCCGGCAT CGTCGCCATC
GTCATTGCAC GGGTGACGAA AAGCGCGATG TGGACCATCG TCGGCGGCAT GGCTGTGCTG
CTGATTCTCA TGAAGGTGAT GGCTTGA
 
Protein sequence
MKALILFGVL LIAGAATYLI RLSFIALEGR MNLPMWFRSA LPYVPAAMLT ALIAPDLLMR 
DGALAVSIDN PRLLAGIVAI VIARVTKSAM WTIVGGMAVL LILMKVMA