| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0270 |
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| Symbol | |
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| ID | 8017893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 281282 |
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| End bp | 282634 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829049 |
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| Product | peptidase M16 domain protein |
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| Protein accession | YP_002980249 |
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| Protein GI | 241661889 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.582885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCA TGTCTCTGAC CCTGAAGACG GCGCTGGTCG CCATTGTTGC AGCGGCAGCG
CAGAGTGCCC TGGCCGCGCT GCCCATCGAA CACTGGACGG CGCCGACCGG CGCGCGCGTG
TTTTTCGTGC CGAGCCCGTC GATTCCGATG CTGGACATCA ACCTCGACGT GGATGCGGGT
TCGCGCTATG AGCCCGCCAA CAAGGTGGGC CTCGCCTCGC TCACAGCGGG CATGCTCGAC
AAGGGCGTTG CCGCGCAGGG CAACGCGCCC GCCCGCGATG AAGCGGCGAT TGCCGATGCG
TTTGCCGATG TGGGCGCGAG CTTTGGCGGC GGCGCCGGTG GTGACCGCAC GAGCCTGCGT
CTGCGCACGC TGTCCGACCC CGTTGAGCGC GGCCCGGCCA TCGCGCTGAT GACGCAGATC
ATTTCAGCGC CGACCTTTCC CGATGCCGTG CTCGCGCGGG ACAAGCAGCG CCTGGTGGCT
GCGATCCGCG AATCGCTGAC CAAACCGTCG GTGCTGGCCG AGCGCGCGTT CGGCAAGGCC
ATCTACGGCA CGCATCCGTA CGGGCAGACC GCTTCGCCGG AAACGGTGGA GAGCATCACG
CGCGACGACA TCGTGCGCTA CTACCAGGCC AACTACACGG CCAAGCGCGC CGTGGTGACG
CTGATCGGCG CGATCAGCCG CCAGGAAGCC GAGGCCATCG CCGAGCAAAT TACGCGCGGC
CTGCCCGCTG ACGGCGCCAC GCCGCCGGGG CTGCCCGACG TGAAGATGCC GCTGGCAAAG
GCGGAGACGA TCCGCATTCC GCACCCGGCG CAGCAGGCGA CCATCATCAT CGGTCAACCG
GGTATCGCGC GCGGCGACAA GGATTACTTC CCGTTGCTGG TCGGCAACTA CGTGCTCGGT
GGCGGCGGTT TCAGTGCGCG GCTGACGAAC GAAGTGCGCG AGAAGCGCGG CCTGACGTAC
AGCATCGGCA GCTACTTCGC GCCCGCCGCG CAGCCCGGTC CGTTCGAACT GGCACTGCAG
ACGCGCAAGG ACCAAACCGA AGAAGCATTG GGCGTGGTGC GCGACACTGT TGCCAAGTTT
GTGGCCGATG GCCCAACCGA TGCGGAACTG AAAGCCGCCA AGGACAACCT CGTCAACGGC
TTCCCGCTGC GCCTGGACAG CAACCGCAAG CTGCTGGACA ACGTGGCCAA CATCGGCTGG
TACAACTTGC CGCTCGACTA TCTGGATACA TGGACGCAGC GCATCGCGGC CGTCACGCGT
GACCAAGTGC GCACGGCATT CCAGCGCGTG CTGCAACCGC AGGCCATGGC GACGATCGTG
GTAGGCGGTC CGGAAAAAGC CGCCGCGAAC TGA
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| Protein sequence | MRTMSLTLKT ALVAIVAAAA QSALAALPIE HWTAPTGARV FFVPSPSIPM LDINLDVDAG
SRYEPANKVG LASLTAGMLD KGVAAQGNAP ARDEAAIADA FADVGASFGG GAGGDRTSLR
LRTLSDPVER GPAIALMTQI ISAPTFPDAV LARDKQRLVA AIRESLTKPS VLAERAFGKA
IYGTHPYGQT ASPETVESIT RDDIVRYYQA NYTAKRAVVT LIGAISRQEA EAIAEQITRG
LPADGATPPG LPDVKMPLAK AETIRIPHPA QQATIIIGQP GIARGDKDYF PLLVGNYVLG
GGGFSARLTN EVREKRGLTY SIGSYFAPAA QPGPFELALQ TRKDQTEEAL GVVRDTVAKF
VADGPTDAEL KAAKDNLVNG FPLRLDSNRK LLDNVANIGW YNLPLDYLDT WTQRIAAVTR
DQVRTAFQRV LQPQAMATIV VGGPEKAAAN
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