Gene Rpic12D_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0211 
Symbol 
ID8017834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp225020 
End bp226780 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content50% 
IMG OID644828992 
ProductATPase 
Protein accessionYP_002980192 
Protein GI241661832 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0158049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000676149 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTGACA ACGAGGTCAT CGCGAAATTG GTGGCGGCTC TGACGCATTT CAAGCCAGGG 
GCGCCGTTGA AGAATTACAT CGCGTACGCA GTCTTCCCGA AATTCAAGAA TCTTGAGGAG
GGAACTCGTA TCGATTTTAA TTTTCCATTA ACTGCACTTG TGGGGCCAAA TGGAATCGGA
AAAAGCTCAG TGCTGCATGC TCTCTGGGGT ATGCCGTACA AATATTCGAC GTCTAAATTC
TGGTTCGAAA CTGCATTAGA TCCAATTGGG CATCCACAAA CCTATTTTTA TGGGCACTGG
AGCGATTCGT TCGGAGGTTT GGTGGAGACG CGTAAGGCCC GAGTTGGAGC GAAACGTGAC
TACTGGGAAC CCGCGCGGCC TCGTCTATCT GATGGAATGT TGCCTATCCC TCCGGGGAAA
TATGAAGGTA AAGCGCTTGA TCGCTGGCAC CCGGTTCGTC GGGAGGTTCG GTACATTAAT
TTGAAGGCTG TTTTTGGCTC GTTTGATCGG TACTTCTATT TTGACGATGA TCGTAGCGGC
GGCGATAGAC GTGAAGCAAT GCTAAGAGAG GCGCTTCGAT TGAAATCCGT TAAAGATCGT
AATCTGCAGT CCTATAAGCT TGGGCGAGGT CAGGAACGAC TATTCGAAAA TAGAGACCTT
ACGAAAAATG AATTGGAGAG TGTGTCCAAA ATTCTTGGAA GAAACTATGA CTCGGCTAGG
ATAATTCGGC ATTCTTTATA TCCGGGGAAT CGGGGGCGAG ATCTTAGTGT GGTCTTTCGT
CGAGGGTCTG AGTATTCTGA GGCATTCGCT GGGAGTGGTG AGATCGCTGC CGTAAGTGCT
GTGGTGGAAA TACTTAAAGC GAAGGACTAT TCTCTAATCC TTTTGGATGA GCCGGAGACA
TCTTTGCACC CTGGTGCGCA GCGCGCTCTC CTGCGATTTC TGTTGGAGCA AATACAGGAG
AAAAATCATC AGATAGTAAT GTCAACTCAT TCTGATGAGT TTATAAAAAA TCTTCCGCAT
GACGCAATTA AGGTGTTTGA GGAGAATGGG CAATTTCGGT CCCGGATTCT CCCGCGAAGT
TCGCCTGATG CGGCGCTGCT GCGGCTTGGG AAGCTTCCCG AAAACGTGCG TCGTGTACTG
GTGGAAGATC CAGTCGCTGC AGCTCTTGTC CTTCATGCCG CAAAGAGCTT GGATCACGGA
GATGCAGCAG CTCTTGAAGT GCGTGTCGCA CCTGGTGGAG CGGAATCAAT CTTGACCTAC
ATGGGCCCAT CAGCGATGGT TTCAGGTGAC AATATATTTT TTATGCTTGA TGGCGATAAG
CGTAAGGTTG ATTCATTTAG CGACCCAGAT ATGATTCCGC CAGCGAAGCA TAATGATCTT
GAGGATTTGA TAAAAAAGGA AATTGGGTGC AAACCTCGAT ACCAGATCCC GGGCGGCGAT
GATAAGCATG GGCACTCAAA TGCGAAGGTG ACGGCGCAAC TGAACTACTT GCGCTGGTTG
CGGAAGAGGG TCTCATACTT GCCGAGGCTT GTGCCGGAGC ATGTGCTGCT TGCGGCAATG
GAGCCGAAGG GAGGACACGA AGATAAGACC GCGAAACAAG CCAAAGTGGC ACTGAAAGGG
TTGCTTACGA AGGGATCCAA ATTCGAGCCT AGCGGAGATG AGCTGCGCGC GCTAATCAAG
ATTGAAATCG GAAAGATTCC TTTCGACAAC GCCGACATCG TCGTCATTCG CGATCAGCTG
CAAAGATGGC TTCACGGCTG A
 
Protein sequence
MGDNEVIAKL VAALTHFKPG APLKNYIAYA VFPKFKNLEE GTRIDFNFPL TALVGPNGIG 
KSSVLHALWG MPYKYSTSKF WFETALDPIG HPQTYFYGHW SDSFGGLVET RKARVGAKRD
YWEPARPRLS DGMLPIPPGK YEGKALDRWH PVRREVRYIN LKAVFGSFDR YFYFDDDRSG
GDRREAMLRE ALRLKSVKDR NLQSYKLGRG QERLFENRDL TKNELESVSK ILGRNYDSAR
IIRHSLYPGN RGRDLSVVFR RGSEYSEAFA GSGEIAAVSA VVEILKAKDY SLILLDEPET
SLHPGAQRAL LRFLLEQIQE KNHQIVMSTH SDEFIKNLPH DAIKVFEENG QFRSRILPRS
SPDAALLRLG KLPENVRRVL VEDPVAAALV LHAAKSLDHG DAAALEVRVA PGGAESILTY
MGPSAMVSGD NIFFMLDGDK RKVDSFSDPD MIPPAKHNDL EDLIKKEIGC KPRYQIPGGD
DKHGHSNAKV TAQLNYLRWL RKRVSYLPRL VPEHVLLAAM EPKGGHEDKT AKQAKVALKG
LLTKGSKFEP SGDELRALIK IEIGKIPFDN ADIVVIRDQL QRWLHG