Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0211 |
Symbol | |
ID | 8017834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 225020 |
End bp | 226780 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644828992 |
Product | ATPase |
Protein accession | YP_002980192 |
Protein GI | 241661832 |
COG category | [R] General function prediction only |
COG ID | [COG4637] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0158049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000676149 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTGACA ACGAGGTCAT CGCGAAATTG GTGGCGGCTC TGACGCATTT CAAGCCAGGG GCGCCGTTGA AGAATTACAT CGCGTACGCA GTCTTCCCGA AATTCAAGAA TCTTGAGGAG GGAACTCGTA TCGATTTTAA TTTTCCATTA ACTGCACTTG TGGGGCCAAA TGGAATCGGA AAAAGCTCAG TGCTGCATGC TCTCTGGGGT ATGCCGTACA AATATTCGAC GTCTAAATTC TGGTTCGAAA CTGCATTAGA TCCAATTGGG CATCCACAAA CCTATTTTTA TGGGCACTGG AGCGATTCGT TCGGAGGTTT GGTGGAGACG CGTAAGGCCC GAGTTGGAGC GAAACGTGAC TACTGGGAAC CCGCGCGGCC TCGTCTATCT GATGGAATGT TGCCTATCCC TCCGGGGAAA TATGAAGGTA AAGCGCTTGA TCGCTGGCAC CCGGTTCGTC GGGAGGTTCG GTACATTAAT TTGAAGGCTG TTTTTGGCTC GTTTGATCGG TACTTCTATT TTGACGATGA TCGTAGCGGC GGCGATAGAC GTGAAGCAAT GCTAAGAGAG GCGCTTCGAT TGAAATCCGT TAAAGATCGT AATCTGCAGT CCTATAAGCT TGGGCGAGGT CAGGAACGAC TATTCGAAAA TAGAGACCTT ACGAAAAATG AATTGGAGAG TGTGTCCAAA ATTCTTGGAA GAAACTATGA CTCGGCTAGG ATAATTCGGC ATTCTTTATA TCCGGGGAAT CGGGGGCGAG ATCTTAGTGT GGTCTTTCGT CGAGGGTCTG AGTATTCTGA GGCATTCGCT GGGAGTGGTG AGATCGCTGC CGTAAGTGCT GTGGTGGAAA TACTTAAAGC GAAGGACTAT TCTCTAATCC TTTTGGATGA GCCGGAGACA TCTTTGCACC CTGGTGCGCA GCGCGCTCTC CTGCGATTTC TGTTGGAGCA AATACAGGAG AAAAATCATC AGATAGTAAT GTCAACTCAT TCTGATGAGT TTATAAAAAA TCTTCCGCAT GACGCAATTA AGGTGTTTGA GGAGAATGGG CAATTTCGGT CCCGGATTCT CCCGCGAAGT TCGCCTGATG CGGCGCTGCT GCGGCTTGGG AAGCTTCCCG AAAACGTGCG TCGTGTACTG GTGGAAGATC CAGTCGCTGC AGCTCTTGTC CTTCATGCCG CAAAGAGCTT GGATCACGGA GATGCAGCAG CTCTTGAAGT GCGTGTCGCA CCTGGTGGAG CGGAATCAAT CTTGACCTAC ATGGGCCCAT CAGCGATGGT TTCAGGTGAC AATATATTTT TTATGCTTGA TGGCGATAAG CGTAAGGTTG ATTCATTTAG CGACCCAGAT ATGATTCCGC CAGCGAAGCA TAATGATCTT GAGGATTTGA TAAAAAAGGA AATTGGGTGC AAACCTCGAT ACCAGATCCC GGGCGGCGAT GATAAGCATG GGCACTCAAA TGCGAAGGTG ACGGCGCAAC TGAACTACTT GCGCTGGTTG CGGAAGAGGG TCTCATACTT GCCGAGGCTT GTGCCGGAGC ATGTGCTGCT TGCGGCAATG GAGCCGAAGG GAGGACACGA AGATAAGACC GCGAAACAAG CCAAAGTGGC ACTGAAAGGG TTGCTTACGA AGGGATCCAA ATTCGAGCCT AGCGGAGATG AGCTGCGCGC GCTAATCAAG ATTGAAATCG GAAAGATTCC TTTCGACAAC GCCGACATCG TCGTCATTCG CGATCAGCTG CAAAGATGGC TTCACGGCTG A
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Protein sequence | MGDNEVIAKL VAALTHFKPG APLKNYIAYA VFPKFKNLEE GTRIDFNFPL TALVGPNGIG KSSVLHALWG MPYKYSTSKF WFETALDPIG HPQTYFYGHW SDSFGGLVET RKARVGAKRD YWEPARPRLS DGMLPIPPGK YEGKALDRWH PVRREVRYIN LKAVFGSFDR YFYFDDDRSG GDRREAMLRE ALRLKSVKDR NLQSYKLGRG QERLFENRDL TKNELESVSK ILGRNYDSAR IIRHSLYPGN RGRDLSVVFR RGSEYSEAFA GSGEIAAVSA VVEILKAKDY SLILLDEPET SLHPGAQRAL LRFLLEQIQE KNHQIVMSTH SDEFIKNLPH DAIKVFEENG QFRSRILPRS SPDAALLRLG KLPENVRRVL VEDPVAAALV LHAAKSLDHG DAAALEVRVA PGGAESILTY MGPSAMVSGD NIFFMLDGDK RKVDSFSDPD MIPPAKHNDL EDLIKKEIGC KPRYQIPGGD DKHGHSNAKV TAQLNYLRWL RKRVSYLPRL VPEHVLLAAM EPKGGHEDKT AKQAKVALKG LLTKGSKFEP SGDELRALIK IEIGKIPFDN ADIVVIRDQL QRWLHG
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