Gene Rpic12D_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0192 
Symbol 
ID8017815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp201505 
End bp202794 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content62% 
IMG OID644828974 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_002980174 
Protein GI241661814 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0620705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC CGTTCTACAA AATCCTGTAC GTGCAGGTGC TGGCGGCCAT CGTCATTGGC 
GTTCTGCTGG GCCATTACTC GCCCGAACTC GCCGTCAAGA TGAAGCCGCT GGGCGATGGC
TTCATCCAAC TGATCAAGAT GGTGATCGGC CCGATCATTT TCTGTACCGT CGTCTCCGGC
ATTGCCGGCA TGCGTGACAT GAAGAAGGTG GGCCGCGTGG GCGGCAAGGC GCTGATCTAC
TTCGAGGTCG TCTCGACCTT CGCGCTGATC ATCGGTCTCG CGGCGGGCCA TATCTTCAAC
CCCGGCGCGG GCTTTAACGT CGACGTCAAC ACCATCGATG CCAAGGCTGT GGCGCAGTAC
GCCGCCAAGG CCCACTCGGC CAGCACGGTC GACTTCCTGC TCAACATTAT CCCGAGCACG
GTGGTGGATG CCTTCGCCAA GGGCGACATC CTGCAGATCC TGCTGATCGC GCTGCTGTTT
GGCGGTGCCC TTTCTGCCAT GGGCGAGCGC GCGCAGATGG TGACGGACTT CATCGACCAG
ATCTCGCACG TGTTCTTCCG CATCGTGCAC GTCATCACGC GTGTGGCCCC CATCGGTGCC
TTTGGTGCCA TGGCATTCAC CATCGGCAAG TACGGCGTGA TCTCGCTGGT GCCGCTGCTC
AAGCTGGTCG GCACGTTCTA CCTCACGGCC ATCATCTTTG TCGTGGTGGT GCTGGGCATC
ATCGCGCGGC TGGTCGGCTT CAACATCTTC CGCTTCGTTG GGTACATCAA GGAAGAACTG
CTGATCGTGC TCGGTACCAG CTCGTCGGAA TCGGCGCTGC CGCACCTGAT GGAAAAGATG
GAGAAGCTGG GCTGCTCGAA GTCGGTGGTG GGCCTGGTGG TTCCGACCGG TTACTCGTTC
AACCTGGACG GCACCAACAT CTACATGACG ATGGCGGTGA TCTTCATCTC GCAGGCGCTG
AACATCGAGC TGACCTGGAC GCAGCAACTG ACCATCCTGG CCGTTGCCAT GCTGACGTCG
AAGGGCGCAT CGGGCATCAC CGGCGCGGGC TTCATCACGC TGGCCGCCAC GCTGGCCGTG
GTGCCGGATA TTCCGGTGGC GGGCATGGTG CTGATTCTCG GTATCGACCG CTTCATGAGC
GAATGCCGTG CCCTGACCAA CATCACCGGC AACGGCGTGG CCTGCGTGGT GATCTCGGCC
TGGGAACGTG AACTGGATCG CGCCAAGCTG GCTCGCGTGC TGTCGGGCGA CCGCAGCGAC
GAGGGCGTGC CGGCCACCCC GGCAGCTTGA
 
Protein sequence
MKKPFYKILY VQVLAAIVIG VLLGHYSPEL AVKMKPLGDG FIQLIKMVIG PIIFCTVVSG 
IAGMRDMKKV GRVGGKALIY FEVVSTFALI IGLAAGHIFN PGAGFNVDVN TIDAKAVAQY
AAKAHSASTV DFLLNIIPST VVDAFAKGDI LQILLIALLF GGALSAMGER AQMVTDFIDQ
ISHVFFRIVH VITRVAPIGA FGAMAFTIGK YGVISLVPLL KLVGTFYLTA IIFVVVVLGI
IARLVGFNIF RFVGYIKEEL LIVLGTSSSE SALPHLMEKM EKLGCSKSVV GLVVPTGYSF
NLDGTNIYMT MAVIFISQAL NIELTWTQQL TILAVAMLTS KGASGITGAG FITLAATLAV
VPDIPVAGMV LILGIDRFMS ECRALTNITG NGVACVVISA WERELDRAKL ARVLSGDRSD
EGVPATPAA