Gene Rpic12D_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0176 
Symbol 
ID8017799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp184337 
End bp185215 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content64% 
IMG OID644828958 
ProductABC transporter related 
Protein accessionYP_002980158 
Protein GI241661798 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGC CCCGCCATCC TCACATCAAG CCCGCAGCGG AACCGCCGGC AATTACGCCC 
GCGCGCGAAC GCGTGATCGA GGTGCGCAAC GTCACTAAGC GCTACGGCAA GGTGACCGTG
CTCGACAACA TCGATCTGGA CGTATTTCGC GGCGAGGTGC TTTCCATCGT CGGCGGTTCG
GGCAGCGGCA AGACGACGTT GCTGCGCCAG GTGGTGGGGC TGGAGAAACC CACCTCGGGC
ACGATCCACA TCTTTGGCGA AGAGCTGACC TGCCAGGTGG GCAACGAACT GCAGTCGATG
CGCAACCGCT GGGGCATGCA GTTTCAGCAC GGCGCGTTGT TCTCGGCGCT GTCCGTGATC
GACAACGTGG CGTTGCCGAT GCGCGAATTG CGCACACTGC CCGACGCGTT CATCCAGCGT
GTGGCGATGC TCAAGCTGCA GATGGTGGGG CTCAGATCCA CCGATGCCGA CAAGATGCCG
TCGGACCTGT CGGGCGGCAT GATCAAGCGC GTGGCACTGG CACGGGCGCT GTCGCTGGAA
CCGGAGCTGG TGTTTCTGGA CGAGCCGACC GCCGGTCTGG ACCCGCGCGC ATCGGACGAT
TACGTTGCGC TTATTCGCGA ACTGCGCCAG GAACTGGGCC TGACGGTGGT GATGGTGACG
CACGATCTCG ACACCCTGGT GGCGCTATCC GACCGCATTG CCGTGCTGGC GGATCGCAAG
GTGCTGGCGG CCAAGCCGCT GGAGCAGATC ATTCAGATCG ATCATCCCTT CATCAAGGAA
TATTTCCTCG GTGAACGGGG CAAACGGGCC CTTATGGCGC TGGGCCCGCA GATGACGGAG
GCGGTGGCTG CAGCCTCGCT TTCGACGCAG GAGGATTGA
 
Protein sequence
MTRPRHPHIK PAAEPPAITP ARERVIEVRN VTKRYGKVTV LDNIDLDVFR GEVLSIVGGS 
GSGKTTLLRQ VVGLEKPTSG TIHIFGEELT CQVGNELQSM RNRWGMQFQH GALFSALSVI
DNVALPMREL RTLPDAFIQR VAMLKLQMVG LRSTDADKMP SDLSGGMIKR VALARALSLE
PELVFLDEPT AGLDPRASDD YVALIRELRQ ELGLTVVMVT HDLDTLVALS DRIAVLADRK
VLAAKPLEQI IQIDHPFIKE YFLGERGKRA LMALGPQMTE AVAAASLSTQ ED