Gene Rpic12D_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0160 
Symbol 
ID8017783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp168514 
End bp169548 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID644828942 
Productputative prolin-rich signal peptide protein 
Protein accessionYP_002980142 
Protein GI241661782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.310491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCTGT TGGCCGTGCT TGTGCTGCAT GTCGTTGCGG TCGAGTGGGT TGCGCGCAGT 
CGTCAGGTGA CGTGGCCGCC CGCGCCGGAA CAGATCATCC CCGCGCTGTT GCTGCTCCCT
GAGCCTGTAC AGCCGCCCCC GCCCCCGGCC ACGCCCACGC CACGGCCGGC TGTACCGCAT
GTGCCCCATC CGGCCGCACC CGCGCCGGCG CCGACACCTG CGCCGGCGCC CGACCTCGCA
AGCATGGACC CGTCCGAGTT CACCAGCGCT GGCGCACAAG CCTCCGGCGA TACCGGCATG
GCCAGAGATC TCAGCGGCGA CGGCCCGGGT GGCCCCCCAG CACCGTCCGG CGAGGGCTTT
TCGCTGCCAC CCTCGGCCAC GCTGCGATAC GCCACTTACG TCAACGGCGT GCGCAACGAA
GACGGTGTGA TCCGCTGGGC CACCGACGGC AAAACTTACA CGCTCGCCGT GGAAATTCCG
TTGCCGTTGT TCTTCGGCAC ACTGGCCTTT CGCAGCGCTG GCACCGTCGG CGACTATGGC
CTGACTCCTA CACGCTATGA AGAAGTGCGC GGCCGCAGGC AGCCCGACGT CACCACGTTC
CACTACGCGA CCGAATCAGC ACCCGCGTCG GGCGTGCAGA GCGCATCCAC AGTCACTTTT
ACACGAACGC CGGCCGTGCT TCCGTTGCCG GAGGGCACAC AAGACCGCTT CAGCGTCTTT
CTGCAATTGA CGGGATTAGC CCGCGGCGGC CCGGAGCGCA TCGCCAGTCC GGGTCTCACC
CTGGAAATTC CGATCGCCGA TACCGATAGC GTGGAAGTCG CCCGCGTCCA GCACATCGGC
GAGGACACTA TCGACACGCC GAACGGCACG ATTCGTGCGC AGCACTTCAT ACGGCTGCCG
CGCCGCGCGG ATGACAAACG GCGTGTAGAG ATCTGGCTGT CCCCCGATCG CGGCTGGCTG
CCGGTACGCC TGCGCCAGAC CGAGCCCAAC GGCATGCAGT TCGATCTGGT CTATCAGTCC
CAGGAAGGAG GCTGA
 
Protein sequence
MVLLAVLVLH VVAVEWVARS RQVTWPPAPE QIIPALLLLP EPVQPPPPPA TPTPRPAVPH 
VPHPAAPAPA PTPAPAPDLA SMDPSEFTSA GAQASGDTGM ARDLSGDGPG GPPAPSGEGF
SLPPSATLRY ATYVNGVRNE DGVIRWATDG KTYTLAVEIP LPLFFGTLAF RSAGTVGDYG
LTPTRYEEVR GRRQPDVTTF HYATESAPAS GVQSASTVTF TRTPAVLPLP EGTQDRFSVF
LQLTGLARGG PERIASPGLT LEIPIADTDS VEVARVQHIG EDTIDTPNGT IRAQHFIRLP
RRADDKRRVE IWLSPDRGWL PVRLRQTEPN GMQFDLVYQS QEGG