Gene Rpal_5319 details

Gene Information

• Locus tag: Rpal_5319
• ID: 6413020
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 5739780
• End bp: 5740451
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642715208
• Product: Carboxymethylenebutenolidase
• Protein accession: YP_001994280
• Protein GI: 192293675
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG0412] Dienelactone hydrolase and related enzymes

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.319881
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGACACG ACATTACGCT GAAGGCAGCC GACGGTTTCG AACTCGGGGG TTATCGGGCC 
GATCCCGCCG GCACGCCGAA AGCCGCGATC GTGGTGATCC AGGAGATCTT CGGCGTCAAT 
CATCACATCC GCAACGTCTG CGATCGCCTC GCAGCGGAAG GCTATGTGGC GCTCGCGCCA 
TCGGTCTTCG ATCGCAGCGA GCGCAACTTC CAGAGCGGCT ATTCGCCGGA GGAGATCGCG 
GTGGCGCGCA AGTTCGTCGC CAATCCGGAC TGGCCGGCGA TGCTGCGCGA CACCCAGGCG 
GCGATCGACG CGGTGCAGGC CGTGGGCCCG GTCGGCATCA TCGGCTTTTG TCTTGGCGGC 
AGCGTCGCCT ATGCGGCGGC CACCAAGCTG CACGGGCTAA AGGCCGCGGT CGGCTATTAC 
GGCGGCGCCA TCGTGCGCTT CGCAGACGAC AGGCCATTGG TGCCGACGCA ATTGCATTTC 
GGCGAAAAAG ATTCTGGCAT TCCGCTCAGC GACGTCGACG CGGTCCGGGC CAAGCGGCCG 
GAGGTCGAGA TCCTGGTCTA TCCGGGCGCC CAGCACGGCT TTGGCTGCGA CGAGCGGGCG 
AGCTACGACA AGCCGAGCTC AGACCTCGCC TGGCAACGCA GCCTGGCGTT CTTCGCCGCG 
CATCTGAAGT AA 

 

Protein sequence

MGHDITLKAA DGFELGGYRA DPAGTPKAAI VVIQEIFGVN HHIRNVCDRL AAEGYVALAP 
SVFDRSERNF QSGYSPEEIA VARKFVANPD WPAMLRDTQA AIDAVQAVGP VGIIGFCLGG 
SVAYAAATKL HGLKAAVGYY GGAIVRFADD RPLVPTQLHF GEKDSGIPLS DVDAVRAKRP 
EVEILVYPGA QHGFGCDERA SYDKPSSDLA WQRSLAFFAA HLK