Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_5276 |
Symbol | |
ID | 6412977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5691691 |
End bp | 5693430 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642715166 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_001994238 |
Protein GI | 192293633 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.606728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGACC AGGACGATAT CCTCGAGCTG ATCGAAGACA CGGATTCGAC GCCGGAGGTA TCGGGCGCAC GGAAATGGAA GATCGCGGTG ATCGACGACG ACACCGCGGT CCACGACGGC ACCCGCTTTG CGCTGAGCGA CTACAGCCTC AACAATCAGG GGTTGGAGAT CCTGTCGGCC TATTCGGGCG CCGAAGGCCG CGAACTGATG CGGGCCCACC CCGATATCGC CGCGGTGCTG CTCGACGTCA TCATGGAGAC CGACGCCGCC GGCCTCGACC TGGTGGAGTT CATCCGCAAC GATCTGAAGA ACGAGACCGT ACGGATCATC CTGCGCACCG GCCAGCCAGG CCAGGCGCCC GAGCGCCGCG TCATCGTCGA CTACGACATC AACGACTACA AGGCCAAGAC CGAGCTCACC GCCGACAAGC TGTTCACCTC GCTGACCGCG GCGCTGCGCA GCTATCAGCA GCTCGAACGG ATGGTGCAGA CCCGGCGCGG CCTCGAAATC ATCATCGACG CCGCCTCGAC GCTGTACGAC TTCAAATCGA TGCAGCGACT CGCCGAAGGC GTGCTGACCC AGCTCGCCTC GCTGCTCAAT GTCGATTGCG CCGGTATCTT GGTCTTACGC GACGCCGGCG ACGAACTGGC GGTTCTAGCC GGCTCGGGCT GCTACAGCCG CTTCATCGGC ACCACAGGCC ACAGCAATTC GCTCGACCCG GACCTTCGTC AGATGGTCGA GGAAGCGTTC CGGCGGCGGA AGCACGAGTT CGCCGACCAT CGCACTGTGC TTTATATCCG GACCGGAAGC GGCCGCGAGG TGGTGGTACT GCTGCAGGCC GAGCGCGAAC TGTCGGACAC CGACCGTTCG CTGGTCGAAA TCTTCGGCAG CCGGCTGTCG ATCGCCTTCG ACAATGTCAT CCTGTATCGG CAGCTGCACG AGGCCAACAC CCAGCTCGAA GAGCGGGTGG CTCAGCGCAC CCGGGCGCTG ACCCAGGCCA ACCGCCGGCT GTCGACGCAG TGGCTGCGGC TGCAGCGCGC CAATGCGTTC AAGAACGAGA TCCTCGGCAC CGTCGCCCAC GACTTGAAGA ACCCGCTCGG CGTCATCCTC GGCCGCACCG AGATGCTGAC CGAGCTGATC GGCGCAGAAT CCTCCAAGGA CCATGTCATC GCCCAGGTCG ATCATATCCG CGACGCCACA CGGCGGTTGA CGCTGATGGT CGATCATCTG ATTTCCGACG CGATGGCGGA TGCGTTCGAC ATCTCGATCC GGCGCGAGGC CGTCGACATC GCCTCGCTGG TCGGTGAGGT CGCCGAGGCC AATCGGCCGA TGGCGCAGAA CAAGCAGCAG GTGATTTCGG TGTCCACACC GGAGGCCTGC TCGACGATGT GCGATTCCGA CCGGATGCGC GAGGCGATCG ACAATCTGGT CAGCAACGCC ATCAAATACA GCCCGATCGG CGGCAACATC GCCCTGCAGG TCGACGGTGA TGGCGACAGC ACCATGATCC GCGTCACCGA CGAGGGCGCA GGCCTGTCGC CGGAAGACCT GAGCCGGCTG TTCGGACGCT TCCAGCGGCT TTCCGCCAAG CCGACCGCGG GCGAAAGCTC GACCGGCCTT GGGTTGTCGA TCGTCAAGAA GATCGTCGAC ATGCACGGCG GCGAGATCAT CGCCGAGAGC CCCGGCCCCG GTCAGGGCTC GACCTTCACC ATCATTCTGC CCGCAGCGCC GGTGTCATGA
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Protein sequence | MADQDDILEL IEDTDSTPEV SGARKWKIAV IDDDTAVHDG TRFALSDYSL NNQGLEILSA YSGAEGRELM RAHPDIAAVL LDVIMETDAA GLDLVEFIRN DLKNETVRII LRTGQPGQAP ERRVIVDYDI NDYKAKTELT ADKLFTSLTA ALRSYQQLER MVQTRRGLEI IIDAASTLYD FKSMQRLAEG VLTQLASLLN VDCAGILVLR DAGDELAVLA GSGCYSRFIG TTGHSNSLDP DLRQMVEEAF RRRKHEFADH RTVLYIRTGS GREVVVLLQA ERELSDTDRS LVEIFGSRLS IAFDNVILYR QLHEANTQLE ERVAQRTRAL TQANRRLSTQ WLRLQRANAF KNEILGTVAH DLKNPLGVIL GRTEMLTELI GAESSKDHVI AQVDHIRDAT RRLTLMVDHL ISDAMADAFD ISIRREAVDI ASLVGEVAEA NRPMAQNKQQ VISVSTPEAC STMCDSDRMR EAIDNLVSNA IKYSPIGGNI ALQVDGDGDS TMIRVTDEGA GLSPEDLSRL FGRFQRLSAK PTAGESSTGL GLSIVKKIVD MHGGEIIAES PGPGQGSTFT IILPAAPVS
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