| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5116 |
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| Symbol | |
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| ID | 6412810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5498526 |
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| End bp | 5500406 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715001 |
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| Product | ferrous iron transport protein B |
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| Protein accession | YP_001994080 |
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| Protein GI | 192293475 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0370] Fe2+ transport system protein B |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCGG TCGATTCTCA GCCGTTCAAC CTTGCCCTGG TTGGAACGCC CAATAGCGGT
AAGACCTCCC TGTTCAACGC GCTGACGGGC AGCCGTCAGA AGGTGGCGAA CTACCCGGGC
GTGACCGTCG AGCGCAAGAC CGGCTTGTTC ACCACGCCGG CCGGCCGCGT CGTCAGCCTG
GTCGACCTGC CGGGCACCTA TTCGCTGCGC GGCCGCAGCC CCGATGAAGA GATCACCCGC
GATGTCGTGC TCGGTCGCAA GTCGGACGAG CCGGTGCCGG ACCTGGTGCT GTGTGTCGCC
GACTCGACAA ACCTGCGGCT GACCTTCCGG CTGATGCTGG AATTGAAGTC GACCGGCCGT
CCGTTGATGC TCGTGCTGAA CATGTACGAC ATCGCCATGC GCCGCGGCGT TACGGTCGAC
GTCGAGAAAC TGTCGGCGCA GCTTGGTATT CCGGTGGTGA CGTCGATCGC GGTCCGCAAG
GGCGGCACGG CGGAGCTGCT GAAGCGGACC GATGAATTCG CCGCCCAGGC GCCAGCGCCC
GAGACCGACA CCCATTGGCG GCCGCTGTCC ACTAGCGAGC TGCGTGCCCT GCAGCGCGAG
GCCGACCGCA TCATCGGTGA ATGCGTCAGC CTGCCGGCGC GGCCTCACAC CCTGACGGCT
CAGGTCGATC GGGTGGTGCT GCATCCCGTC GCCGGCCTGC TGATCCTGGT CCTGATCCTG
TTCGTGATGT TCCAGGCGGT GTTCTCCTGG GCGCAGCCGA TCATGGAGCT GATCTCCGGT
GGCTTCGAGG CCCTCGGCGC CTTCGTCCAG GCCAACATGC CCGAAGGGCT GCTGCAGAGC
TTTCTGCAGA ACGGCGTGAT CTCCGGCGTC GGCAGCGTCC TCGTGTTCCT GCCGCAGATC
ATCATCATCT TCCTGTTCAT CCTGCTGCTG GAAGACCTCG GCTACATGGC GCGCGCCGCG
TTCCTGATGG ATCGCATCAT GGGCGGCGCC GGGCTGCACG GCCGTGCCTT CATTCCGCTG
CTGTCGAGCT TCGCCTGCGC GATCCCCGGC ATCATGGCGA CGCGCGTGAT CGATAACCGC
CGCGACCGCC TCACCACCAT CCTGATCGCG CCGCTGATGA CCTGCTCGGC GCGCATCCCG
GTCTATACGC TGATCATCTC GGCCTTCGTG CCGGCCAAGG AGGTGTTCGG CTGGATCAAT
CTGCAGGGGC TGGTGATGTT CGGCCTCTAT ACTGCGGGCA TCGTCAGCGC GCTGACGGTG
TCGGCGCTGG TCAAGTTCTT CATGTGGCGC GACTACGAGC CGGCACCGTT CATGCTCGAA
CTGCCGGACT ACAAGCTGCC GCGGCTGCAG AGTGTTGCCA TCGGCATCTA TATCCGCGCC
AAGATGTTCC TGCAGCGCGC CGGTACTACC ATCTTCTCGA TGATGGTGCT GATCTGGTTC
CTGGCCTCGT TCCCGCGCCC GCCGATCGGC GCGACCGAGC CGGCGATCGA CTACAGCCTG
GCCTCGATCA TCGGTCACGC GGTCGAGCCG GTACTGGCGC CGCTCGGCTT CAACTGGCAG
ATCGCGGTGG CGCTGATCCC CGGCATGGCG GCGCGCGAAG TCGCGGTCGC GGCGCTCGGC
ACCGTCTATG CGATTGAAGG CGGCAAGGAG GCGGCCGAGC AGATTGGCCA AGTGCTGGCC
TCGAAGTGGA GCCTGGCCAC CGCGCTGTCG CTGCTGGCCT GGTTCGTGTT CGCGCCGCAA
TGCGCCTCGA CGCTGGCGGT GATCAAGCGC GAGACCGGAA GCTGGCGCTG GATGGGCGTC
ACCTTCATCT ACATGTTCGC GCTCGCCTAC ATTGCCAGCC TGATCACCTA CAACGTCGCG
GTCGCCTTCG GCGCCGGCTA G
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| Protein sequence | MSSVDSQPFN LALVGTPNSG KTSLFNALTG SRQKVANYPG VTVERKTGLF TTPAGRVVSL
VDLPGTYSLR GRSPDEEITR DVVLGRKSDE PVPDLVLCVA DSTNLRLTFR LMLELKSTGR
PLMLVLNMYD IAMRRGVTVD VEKLSAQLGI PVVTSIAVRK GGTAELLKRT DEFAAQAPAP
ETDTHWRPLS TSELRALQRE ADRIIGECVS LPARPHTLTA QVDRVVLHPV AGLLILVLIL
FVMFQAVFSW AQPIMELISG GFEALGAFVQ ANMPEGLLQS FLQNGVISGV GSVLVFLPQI
IIIFLFILLL EDLGYMARAA FLMDRIMGGA GLHGRAFIPL LSSFACAIPG IMATRVIDNR
RDRLTTILIA PLMTCSARIP VYTLIISAFV PAKEVFGWIN LQGLVMFGLY TAGIVSALTV
SALVKFFMWR DYEPAPFMLE LPDYKLPRLQ SVAIGIYIRA KMFLQRAGTT IFSMMVLIWF
LASFPRPPIG ATEPAIDYSL ASIIGHAVEP VLAPLGFNWQ IAVALIPGMA AREVAVAALG
TVYAIEGGKE AAEQIGQVLA SKWSLATALS LLAWFVFAPQ CASTLAVIKR ETGSWRWMGV
TFIYMFALAY IASLITYNVA VAFGAG
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