| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5111 |
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| Symbol | |
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| ID | 6412805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5492122 |
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| End bp | 5493678 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714996 |
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| Product | nitrogenase cofactor biosynthesis protein NifB |
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| Protein accession | YP_001994075 |
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| Protein GI | 192293470 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC TGCTGCAACT GCACGATTTC AGCGCGCTGG GAACGACGTC GTTCGACGAG
ATGCGCAAGA GCGCGGCGCA ATCGGGCTGC AGCAGCAAAA GCGGCGCCGG CAAGACCGGC
TGCGGCTCGG CCGCTGGCCC CAGCGATCTG CCGCCGGAAG TCTGGGAGAA GGTGAAGAAT
CATCCCTGCT ACAGCGAGCA GGCGCATCAT CACTTCGCCC GCATGCACGT CGCGGTCGCG
CCCGCGTGCA ACATCCAGTG CAATTACTGC AATCGCAAAT ACGATTGCGC CAATGAATCC
CGTCCCGGCG TGGTCAGCGA GAAGCTGACC CCAGAGCAGG CCGCGCGCAA AGTCGTCGCA
GTGGCCTCGA CCATCCCGCA GATGACAGTA CTCGGCATCG CCGGTCCGGG TGATGCGCTT
GCCAATCCGG CCAAGACCTT CAAGACCTTC GAGCTGGTCA CCGAGACCGC GCCCGACATC
AAGCTGTGCC TGTCGACCAA CGGCCTGATG CTGCCCGACT ATGTCGAGCA GATCGCCGCC
ATGAAGGTCG ATCACGTCAC CATCACGATC AATATGGTCG ATCCGGAGGT CGGCGCGAAG
ATCTACCCGT GGATCTTCTA CAATCACCGC CGTTACACCG GCGTCGAGGC GTCGAAGATC
CTCAGCGAGC GGCAGTTGCT CGGACTGGAG ATGCTGGTCG CACGCGGCAT CCTGGTGAAG
GTCAACTCGG TGATGATCCC GGGCATTAAC GACGAGCACC TGATCGAGGT CAACAAGGCG
GTGAAGTCGC GCGGCGCCTT CCTGCACAAC ATCATGCCGC TGATCTCCGA AGCCGAGCAC
GGCACTGCGT TCGGCCTGTC GGGCCAGCGC GGCCCGACCG CGCAGGAGCT GAAGGCGCTG
CAGGACGCCT GCGAAGGCGA GATGAACATG ATGCGGCACT GCCGGCAGTG CCGCGCCGAC
GCGGTCGGCC TGCTCGGCGA GGATCGCAGC GCCGAGTTCA CCACCGAAAA GGTGATGGCG
ATGGACGTCG AATACGACCT CGCCGCGCGC CAGGCCTACC AGGCCAAGGT CGAGGCCGAG
CGCGACGCGA TCGCGGTCGC CAAGCAGCGC GAGCTGGAGA AGCTCGCCGA CGAGACGGCG
ACCATCAAGA TCCAGGTGGC GATCGCCACC AAGGGCGGCG GCGTCATCAA CGAGCACTTC
GGCCACGCCC ACGAGTTCCA GATCTACGAG GTGTCGACCG CCGGTGCGAA GTTCGTCGGC
CACCGCCGTG TCGATCTGTA TTGCGAAGGC GGTTACGCCA GCGAAACCGG TATCGAGCCG
ATCCTCAAGG CGCTGAATGA CTGCACCGCC GTGCTGGTCG CCAAGATCGG CATGTGCCCG
AAGGACTCGC TCGCCGGTGC CGGCATCGAG GCAGTCGAGA CCTACGCATT CGAATACATC
GAGCAGTCGG TGATCGCGTA TTTCAAGGAA TACCTGGAAC GCGTCGGCAA GTCGGAGATT
CGCCACGTCG CGCGAGGCGA TGCCACGATC CGCCAGGGCG CGTTCACCGA GGCCTAG
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| Protein sequence | MSKLLQLHDF SALGTTSFDE MRKSAAQSGC SSKSGAGKTG CGSAAGPSDL PPEVWEKVKN
HPCYSEQAHH HFARMHVAVA PACNIQCNYC NRKYDCANES RPGVVSEKLT PEQAARKVVA
VASTIPQMTV LGIAGPGDAL ANPAKTFKTF ELVTETAPDI KLCLSTNGLM LPDYVEQIAA
MKVDHVTITI NMVDPEVGAK IYPWIFYNHR RYTGVEASKI LSERQLLGLE MLVARGILVK
VNSVMIPGIN DEHLIEVNKA VKSRGAFLHN IMPLISEAEH GTAFGLSGQR GPTAQELKAL
QDACEGEMNM MRHCRQCRAD AVGLLGEDRS AEFTTEKVMA MDVEYDLAAR QAYQAKVEAE
RDAIAVAKQR ELEKLADETA TIKIQVAIAT KGGGVINEHF GHAHEFQIYE VSTAGAKFVG
HRRVDLYCEG GYASETGIEP ILKALNDCTA VLVAKIGMCP KDSLAGAGIE AVETYAFEYI
EQSVIAYFKE YLERVGKSEI RHVARGDATI RQGAFTEA
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