| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5069 |
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| Symbol | |
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| ID | 6412763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5455182 |
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| End bp | 5456651 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714954 |
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| Product | Membrane protein involved in the export of O-antigen and teichoic acid-like protein |
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| Protein accession | YP_001994033 |
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| Protein GI | 192293428 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.932341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCAGG ACGGTGGCGG CGGGATTGTC GACGTGGTGA ACCCGGTCCC TCGGAGGATC
GTTCCCACCG TCGAGTGCTC TCTCGAAATC TGCAAACCCG TCGCGAGGTT GATGATTTTG
AAATTCCGTA CCACGCTCGA AAGACTGATC AACCTGAGCA AGAACGCCGG GATTCGCGCC
ATGACCGGCG CGTTCGGGTT GCGCGTGCTG ATCACGATCG TCAATCTCGG ACTGGTGACG
CTCGCCGCGC GGACTCTCAG CGGACACGAT TTCGGCACCT ATTCGATGCT GTTCAGCGCC
GCCAGCCTGC TCAGCGTGGT CGCTACCTTC GGCCAACAGA TCTTCATCAT GCGGTCGTGG
AGCGAATACA CCACCGCCGG AGACGAGCCG AAGCTAAAGG GCGCGATGAT CTTCACGACG
CTCGCCTGCT TTGCCGGCAG CGTGCTGGTC GGGCTGCCGT TCTTCTTCTG GGTATCGGCC
GAGCACGACA CGCTGCTGGC GCTGTCGGCG ACGTTGTATC TGGTCTGCTT TGCGGTGATG
CTGATTTCGG CGCACGTCAC CCGCGGTGCC GTCGGCGTCG GTGTCAGCGA CGGTCTGACC
TATCTGCTGG TCGCCACCTG TCCGATGGTT TACCTCGCGG GCTGCGTCAT CATCGGCGCG
CCGATCGAAA TCCACACCAT CTTCCTCACC ATGGCGGGGG CCTCCTGCTT CACCGTGATG
GTGCAGATGA CATTGTTGCG GCGGCGGGTC CACGCTCAAT TCCCGCATAT CGGCCGCTCA
CGCTCAGCCT TCGAGTTGCG CACCTGGAGC GCCCGCTCGG CCAAGCTGTG GGTGTCGGGC
TGCCTGGAGG CCGCCAATCA ATACGCCGAC GTGGTGATCA TCGGCTACCT GATGAGTCCG
ACCGTCGCCG GCGCGTATTT CGTCACCACC CGGATCGCCA ACGCGTTCGC AATGGCTACC
GGTGCCGTCT ACATCTTCTC GACCCGGCAC TTCCCGCATC TGTATTACAG CCGGCAACAT
CGCGAACTCG ACGGCCTGCT GGATTCGGTG GCGCTCGTCA CCCTGGCGAT CGTGATCGGC
GGCCTGATGG TGGTGCTCGG CGGTGGCCAC TGGATCCTGT ATCTCTTCAA TGCCGATTAC
GTCTCGTACT ACAGTGCCCT GGCAATCCTG ACCGCTGGGA CCGCGGCAGT CGCTGCGGCC
GGGCCGTGCG GCTCGATCCT GATGTTGACG GGTCACGAGG GTCGCTATCT GGCGATCATC
GGCGGCACTG TGCTGATGCG CGCGGTCGGG TTCTTCGTGC TGATCCCGCT GTTCGGCATC
TCCGGCGCTG TGGCGGCGAC CGCGATCTCG TTCATCGCAC TGGCGCTGCT GATGCGCAGC
GCATCGATTC ACCTCGCCGG CATCGATGGG TCCGTGTTGC GGCTGGTGAC GGGCTGGCGT
CAGCGCCGAC TCACCCAGCC GGCGGAATGA
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| Protein sequence | MRQDGGGGIV DVVNPVPRRI VPTVECSLEI CKPVARLMIL KFRTTLERLI NLSKNAGIRA
MTGAFGLRVL ITIVNLGLVT LAARTLSGHD FGTYSMLFSA ASLLSVVATF GQQIFIMRSW
SEYTTAGDEP KLKGAMIFTT LACFAGSVLV GLPFFFWVSA EHDTLLALSA TLYLVCFAVM
LISAHVTRGA VGVGVSDGLT YLLVATCPMV YLAGCVIIGA PIEIHTIFLT MAGASCFTVM
VQMTLLRRRV HAQFPHIGRS RSAFELRTWS ARSAKLWVSG CLEAANQYAD VVIIGYLMSP
TVAGAYFVTT RIANAFAMAT GAVYIFSTRH FPHLYYSRQH RELDGLLDSV ALVTLAIVIG
GLMVVLGGGH WILYLFNADY VSYYSALAIL TAGTAAVAAA GPCGSILMLT GHEGRYLAII
GGTVLMRAVG FFVLIPLFGI SGAVAATAIS FIALALLMRS ASIHLAGIDG SVLRLVTGWR
QRRLTQPAE
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