Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_5056 |
Symbol | |
ID | 6412750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5439155 |
End bp | 5440246 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714941 |
Product | inner-membrane translocator |
Protein accession | YP_001994020 |
Protein GI | 192293415 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTGG TGCTTGAGAG GCGCAGCGAG CGATCGGTGG CGATCGCGCT TGCCTCGCCG CTGCTGGCGA TCGCACTGAC GCTGGCGACC ATGACGATCG TGTTTGCCGC GCTCGGTCAG AATCCGGCCG CAGCGCTGGC AGTGTACTTC ATCACGCCGC TGACCGACGG CTATTCGCTG CAAGAGATCG CGGTGAAGGC CTCGCCGCTG GTGATGATCG CGGTCGGATT GGCGCTGTGC TATCGCGCCA ATGCCTGGAA CATCGGCGCC GAAGGCCAAT TGCTGATCGG CGCGATCGCC GGCAGCGGCT TGGCGGTGAT GATGCACGGG ACCAATCCCG GACCGTGGCT GCTGCCGGTG ATGCTACTGG CGGGAGCGCT GGCCGGTGCC GCCTATGCGC TGATCCCGGC GCTGTGCAAG GTGAAGTTCG GCGCCTCCGA AATCCTGATC AGCCTGATGC TGGTCTATGT CGCGGGCCTG CTGCTCGACT ATCTGGTGCG CGGGCCGTGG CGAGATCCCG CCGGATTCAA CTTCCCGACG ACCGCCGAGT TCGACCCTGC AGCGACGCTG CCGCTACTGA TCGCCGGCAG CCGCGTCCAT GCCGGTCTGA TCCTGACGCT GGTTGCGGTC GCGGCCGCGG CCGTGCTGCT CGGGCGGACG TTGAAGGGTT TCGAGATCCG GGTGGTCGGC ACCGCCCCGC GCGCGGCGCG GTTTGCCGGC TTCAATGCCG ACCGCCTGGT GCTGACGACG TTCGCGATCT CCGGCGCCCT GGCCGGCCTT GCCGGCATCA TCGAAGTCGC CGGCCCGATC GGACATCTGC AGCCGGACAT CTCGCCGGGC TACGGCTTCA CTGCGATCAT TGTGGCGTTT CTCGGCCGGC TCAATCCGCT CGGCATCCTC GCCAGCGGAC TGTTCCTGGC AATGACCTTC ATCGGCGGCG AGCAGGCGCA GATCGCGCTC AAACTGCCAC AGGACATGAC CGGCGTGATC CAGGGCATCC TGCTGTTCTA CGTGCTCGCC TGCGACTCGC TGATCCTGTA CCGCATCCGC TGGCGCAGTC CGCAACGAAA GGCGTTGCAT GGGCCTCATT GA
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Protein sequence | MSLVLERRSE RSVAIALASP LLAIALTLAT MTIVFAALGQ NPAAALAVYF ITPLTDGYSL QEIAVKASPL VMIAVGLALC YRANAWNIGA EGQLLIGAIA GSGLAVMMHG TNPGPWLLPV MLLAGALAGA AYALIPALCK VKFGASEILI SLMLVYVAGL LLDYLVRGPW RDPAGFNFPT TAEFDPAATL PLLIAGSRVH AGLILTLVAV AAAAVLLGRT LKGFEIRVVG TAPRAARFAG FNADRLVLTT FAISGALAGL AGIIEVAGPI GHLQPDISPG YGFTAIIVAF LGRLNPLGIL ASGLFLAMTF IGGEQAQIAL KLPQDMTGVI QGILLFYVLA CDSLILYRIR WRSPQRKALH GPH
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