Gene Rpal_5004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5004 
Symbol 
ID6412696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5388681 
End bp5389037 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content64% 
IMG OID642714887 
Productresponse regulator receiver protein 
Protein accessionYP_001993968 
Protein GI192293363 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.325761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAAGA CGGTTCTGAT CGTCGAAGAC GAATTCCTGA TCGCGATGGA TCTGGTCCGG 
ATGGTCGAAG GCGATGGCTG GAGGATCATC GGACCGGTCG CGACCGTGCA GGATGCGCTC
CGTCTGCTCG AAGCCGAGCT TCCCTCGGTG GCGATGCTCG ACGTCAATCT CGGCAAAGAG
CTGGTCACGC CGGTGGCGGA ACGGTTGAAG GCGCAGAACG TGCCGTTCGC GGTGGCCAGC
GCCTATGACA AGCCGGAAAG CCATGGCGGC GACGTGCTGG CCGGCGTCCC GAATGTCGGC
AAGCCGGCGA GCGAACGGCG GCTGCTGGCG ACCTTGAAGC AGCTCACCGA GAGCTGA
 
Protein sequence
MQKTVLIVED EFLIAMDLVR MVEGDGWRII GPVATVQDAL RLLEAELPSV AMLDVNLGKE 
LVTPVAERLK AQNVPFAVAS AYDKPESHGG DVLAGVPNVG KPASERRLLA TLKQLTES